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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • golgi 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, golgi, mitochondrion
BaCelLo:cytosol
EpiLoc:golgi
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_16s0100g00840.t01 Wine grape cytosol 98.98 98.98
VIT_16s0100g00800.t01 Wine grape cytosol 79.59 98.42
VIT_16s0100g01040.t01 Wine grape cytosol 95.41 95.41
VIT_16s0100g00900.t01 Wine grape cytosol 95.41 95.41
VIT_16s0100g00850.t01 Wine grape cytosol 95.15 95.15
VIT_16s0100g00860.t01 Wine grape cytosol 86.22 94.94
VIT_16s0100g00940.t01 Wine grape cytosol 94.9 94.9
VIT_16s0100g00930.t01 Wine grape cytosol 94.9 94.9
VIT_16s0100g01000.t01 Wine grape cytosol 94.9 94.9
VIT_16s0100g01020.t01 Wine grape cytosol 94.39 94.39
VIT_16s0100g00880.t01 Wine grape cytosol 94.39 94.39
VIT_16s0100g00770.t01 Wine grape cytosol 94.39 94.39
VIT_16s0100g01140.t01 Wine grape cytosol 93.88 93.88
VIT_16s0100g01010.t01 Wine grape cytosol 93.62 93.62
VIT_16s0100g01030.t01 Wine grape cytosol 93.62 93.62
VIT_16s0100g01170.t01 Wine grape cytosol 93.37 93.37
VIT_16s0100g01120.t01 Wine grape cytosol 93.37 93.37
VIT_16s0100g01150.t01 Wine grape cytosol 93.37 93.37
VIT_16s0100g00750.t01 Wine grape cytosol 93.37 93.37
VIT_16s0100g00830.t01 Wine grape cytosol 93.11 93.11
VIT_16s0100g00990.t01 Wine grape cytosol 93.11 93.11
VIT_16s0100g00780.t01 Wine grape cytosol 92.86 92.86
VIT_10s0042g00920.t01 Wine grape cytosol 92.86 92.86
VIT_10s0042g00930.t01 Wine grape cytosol 92.86 92.86
VIT_16s0100g00910.t01 Wine grape cytosol 92.86 92.86
VIT_10s0042g00910.t01 Wine grape cytosol 83.67 89.62
VIT_16s0100g01130.t01 Wine grape cytosol 92.86 85.45
VIT_14s0068g00920.t01 Wine grape cytosol 76.79 76.59
VIT_14s0068g00930.t01 Wine grape cytosol 76.53 76.34
VIT_05s0136g00260.t01 Wine grape cytosol 73.98 74.55
VIT_16s0022g01020.t01 Wine grape cytosol 54.59 69.48
GSMUA_Achr6P08170_001 Banana cytosol 62.5 66.58
GSMUA_Achr6P08180_001 Banana cytosol 63.27 62.0
TraesCS7B01G462200.1 Wheat cytosol 46.43 60.87
VIT_15s0021g02170.t01 Wine grape cytosol 40.82 41.13
VIT_03s0038g01460.t01 Wine grape cytosol 39.54 39.54
VIT_16s0100g01110.t01 Wine grape cytosol, mitochondrion, nucleus 79.34 6.01
VIT_12s0059g01780.t01 Wine grape extracellular, mitochondrion, nucleus 3.06 0.64
Protein Annotations
KEGG:00941+2.3.1.74EntrezGene:100255481wikigene:100255481EntrezGene:100853632wikigene:100853632EntrezGene:109121404
Gene3D:3.40.47.10MapMan:9.2.2.1.1.1EMBL:AM459972ProteinID:CAN72347ProteinID:CAN72347.1ProteinID:CCB56443
ProteinID:CCB56443.1InterPro:Chalcone/stilbene_synth_CInterPro:Chalcone/stilbene_synthase_ASInterPro:Chalcone/stilbene_synthase_NUniProt:F6HP37EMBL:FN596000
GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0016740
GO:GO:0016746GO:GO:0016747InterPro:IPR016039EntrezGene:LOC100255481wikigene:LOC100255481EntrezGene:LOC100853632
wikigene:LOC100853632PFAM:PF00195PFAM:PF02797PIRSF:PIRSF000451ScanProsite:PS00441PANTHER:PTHR11877
PANTHER:PTHR11877:SF27InterPro:Polyketide_synthase_type-IIISUPFAM:SSF53901InterPro:Thiolase-likeUniParc:UPI000210854CArrayExpress:VIT_16s0100g00920
EnsemblPlantsGene:VIT_16s0100g00920EnsemblPlants:VIT_16s0100g00920.t01unigene:Vvi.23415RefSeq:XP_002278299RefSeq:XP_002278299.2RefSeq:XP_003634072
RefSeq:XP_003634072.1SEG:seg::::
Description
No Description!
Coordinates
chr16:-:16405075..16406533
Molecular Weight (calculated)
42931.8 Da
IEP (calculated)
6.785
GRAVY (calculated)
-0.098
Length
392 amino acids
Sequence
(BLAST)
001: MASVEEIRNA QRAKGPATVL AIGTATPDNC LYQSDFADYY FRVTKSEHMT ELKKKFNRIC DKSMIKKRYS HLTEEMIEEH PNIGAYMAPS LNIRQEIITA
101: EVPKLGKEAA LKALKEWGQP KSKITHLVFC TTSGVEMPGA DYKLANLLGL ETSVRRVMLY HQGCYAGGTV LRTAKDLAEN NAGARVLVVC SEITVVTFRG
201: PSETALDSLV GQALFGDGSA AVIVGSDPDL SIERPLFQLV SAAQTFIPNT QGAIAGNLRE VGLTFHLWPN VPTLISENIE KCLTQAFDPI GINDWNSLFW
301: IAHPGGPAIL DAVEAKLSLD KQKLKATRHV LSEYGNMSSA CVLFIMDEMR KKSLKEQKTT TGEGLDWGVL FGFGPGLTIE TVVLHSIPRD SN
Best Arabidopsis Sequence Match ( AT4G00040.1 )
(BLAST)
001: MLVSARVEKQ KRVAYQGKAT VLALGKALPS NVVSQENLVE EYLREIKCDN LSIKDKLQHL CKSTTVKTRY TVMSRETLHK YPELATEGSP TIKQRLEIAN
101: DAVVQMAYEA SLVCIKEWGR AVEDITHLVY VSSSEFRLPG GDLYLSAQLG LSNEVQRVML YFLGCYGGLS GLRVAKDIAE NNPGSRVLLT TSETTVLGFR
201: PPNKARPYNL VGAALFGDGA AALIIGADPT ESESPFMELH CAMQQFLPQT QGVIDGRLSE EGITFKLGRD LPQKIEDNVE EFCKKLVAKA GSGALELNDL
301: FWAVHPGGPA ILSGLETKLK LKPEKLECSR RALMDYGNVS SNTIFYIMDK VRDELEKKGT EGEEWGLGLA FGPGITFEGF LMRNL
Arabidopsis Description
Type III polyketide synthase C [Source:UniProtKB/Swiss-Prot;Acc:O81305]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.