Factsheet for VIT_10s0042g00920.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0042g00930.t01	Wine grape	cytosol	99.23	99.23
VIT_10s0042g00910.t01	Wine grape	cytosol	88.52	94.81
VIT_16s0100g01170.t01	Wine grape	cytosol	94.64	94.64
VIT_16s0100g01140.t01	Wine grape	cytosol	94.64	94.64
VIT_16s0100g01010.t01	Wine grape	cytosol	94.64	94.64
VIT_16s0100g00830.t01	Wine grape	cytosol	94.39	94.39
VIT_16s0100g00750.t01	Wine grape	cytosol	94.39	94.39
VIT_16s0100g00770.t01	Wine grape	cytosol	94.13	94.13
VIT_16s0100g00910.t01	Wine grape	cytosol	94.13	94.13
VIT_16s0100g00990.t01	Wine grape	cytosol	94.13	94.13
VIT_16s0100g00780.t01	Wine grape	cytosol	94.13	94.13
VIT_16s0100g01030.t01	Wine grape	cytosol	93.88	93.88
VIT_16s0100g01120.t01	Wine grape	cytosol	93.88	93.88
VIT_16s0100g01150.t01	Wine grape	cytosol	93.88	93.88
VIT_16s0100g00800.t01	Wine grape	cytosol	75.77	93.69
VIT_16s0100g00920.t01	Wine grape	cytosol	92.86	92.86
VIT_16s0100g01040.t01	Wine grape	cytosol	92.6	92.6
VIT_16s0100g00900.t01	Wine grape	cytosol	92.6	92.6
VIT_16s0100g00840.t01	Wine grape	cytosol	92.35	92.35
VIT_16s0100g00930.t01	Wine grape	cytosol	92.35	92.35
VIT_16s0100g00940.t01	Wine grape	cytosol	92.35	92.35
VIT_16s0100g01000.t01	Wine grape	cytosol	92.09	92.09
VIT_16s0100g00850.t01	Wine grape	cytosol	92.09	92.09
VIT_16s0100g01020.t01	Wine grape	cytosol	91.84	91.84
VIT_16s0100g00880.t01	Wine grape	cytosol	91.58	91.58
VIT_16s0100g00860.t01	Wine grape	cytosol	83.16	91.57
VIT_16s0100g01130.t01	Wine grape	cytosol	93.62	86.15
VIT_14s0068g00930.t01	Wine grape	cytosol	77.04	76.84
VIT_14s0068g00920.t01	Wine grape	cytosol	76.53	76.34
VIT_05s0136g00260.t01	Wine grape	cytosol	74.23	74.81
VIT_16s0022g01020.t01	Wine grape	cytosol	54.59	69.48
GSMUA_Achr6P08170_001	Banana	cytosol	63.27	67.39
TraesCS7B01G462200.1	Wheat	cytosol	47.7	62.54
GSMUA_Achr6P08180_001	Banana	cytosol	63.27	62.0
VIT_15s0021g02170.t01	Wine grape	cytosol	41.07	41.39
VIT_03s0038g01460.t01	Wine grape	cytosol	41.07	41.07
VIT_16s0100g01110.t01	Wine grape	cytosol, mitochondrion, nucleus	80.61	6.1
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.57	0.74

Protein Annotations

KEGG:00941+2.3.1.74	EntrezGene:100266562	wikigene:100266562	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	ProteinID:AAT84774
ProteinID:AAT84774.1	ProteinID:AAT84788	ProteinID:AAT84788.1	ProteinID:AAT84815	ProteinID:AAT84815.1	ProteinID:AAT84820
ProteinID:AAT84820.1	ProteinID:AAT84821	ProteinID:AAT84821.1	ProteinID:AAT84843	ProteinID:AAT84843.1	ProteinID:AAT84880
ProteinID:AAT84880.1	ProteinID:AAT84911	ProteinID:AAT84911.1	ProteinID:AAT84933	ProteinID:AAT84933.1	ProteinID:AAT84968
ProteinID:AAT84968.1	EMBL:AM450362	EMBL:AY670107	EMBL:AY670121	EMBL:AY670148	EMBL:AY670153
EMBL:AY670154	EMBL:AY670176	EMBL:AY670213	EMBL:AY670244	EMBL:AY670266	EMBL:AY670301
ProteinID:CAN61105	ProteinID:CAN61105.1	ProteinID:CCB52118	ProteinID:CCB52118.1	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS
InterPro:Chalcone/stilbene_synthase_N	UniProt:F6HIS2	EMBL:FN595766	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039
EntrezGene:LOC100266562	wikigene:LOC100266562	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	ScanProsite:PS00441
PANTHER:PTHR11877	PANTHER:PTHR11877:SF27	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI00015CB814
ArrayExpress:VIT_10s0042g00920	EnsemblPlantsGene:VIT_10s0042g00920	EnsemblPlants:VIT_10s0042g00920.t01	RefSeq:XP_002271371	RefSeq:XP_002271371.1	SEG:seg

Description

No Description!

Coordinates

chr10:+:14298956..14300552

Molecular Weight (calculated)

42858.7 Da

IEP (calculated)

6.673

GRAVY (calculated)

-0.082

Length

392 amino acids

Sequence
(BLAST)

001: MASVEDIRNA QRAKGPATIL AIGTATPDNC VYQSDYADYY FRVTKSEHMT DLKKKFNRIC EKSMIKKRYI HLTEEMLEEH PNMGAYMAPS LNIRQEIITA
101: EVPKLGKEAA LKALKEWGQP KSKITHLVFC TTSGVEMPGA DYKLANLLGL ETSVRRVMLY HQGCYAGGTV LRTAKDLAEN NAGARVLVVC SEITVVTFRG
201: PSETHLDSLV GQALFGDGSA AVIVGSDPDT SIERPLFQLV SAAQTFIPNT QGAIAGNLRE VGLTFHLWPN VPTLISENIE KCLTQAFGPL GISDWNSLFW
301: IAHPGGPAIL DAIEAKLNLE KKKLEATRHI LSEYGNMSSA CVLFILDEMR KKSLKEERTT TGEGLDWGVL FGFGPGLTIE TVVLHSVAGA TN

Best Arabidopsis Sequence Match ( AT5G13930.1 )
(BLAST)

001: MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL

Arabidopsis Description

CHSTT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UKS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.