Factsheet for VIT_16s0100g01140.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0100g01170.t01	Wine grape	cytosol	99.49	99.49
VIT_16s0100g01010.t01	Wine grape	cytosol	98.47	98.47
VIT_16s0100g00770.t01	Wine grape	cytosol	98.47	98.47
VIT_16s0100g00830.t01	Wine grape	cytosol	98.21	98.21
VIT_16s0100g01030.t01	Wine grape	cytosol	98.21	98.21
VIT_16s0100g00990.t01	Wine grape	cytosol	97.96	97.96
VIT_16s0100g00780.t01	Wine grape	cytosol	97.96	97.96
VIT_16s0100g00910.t01	Wine grape	cytosol	97.96	97.96
VIT_16s0100g01120.t01	Wine grape	cytosol	97.96	97.96
VIT_16s0100g01150.t01	Wine grape	cytosol	97.96	97.96
VIT_16s0100g00750.t01	Wine grape	cytosol	97.7	97.7
VIT_16s0100g00900.t01	Wine grape	cytosol	94.9	94.9
VIT_10s0042g00930.t01	Wine grape	cytosol	94.64	94.64
VIT_10s0042g00920.t01	Wine grape	cytosol	94.64	94.64
VIT_16s0100g01000.t01	Wine grape	cytosol	94.39	94.39
VIT_16s0100g00930.t01	Wine grape	cytosol	94.39	94.39
VIT_16s0100g00800.t01	Wine grape	cytosol	76.28	94.32
VIT_16s0100g00850.t01	Wine grape	cytosol	94.13	94.13
VIT_16s0100g00940.t01	Wine grape	cytosol	94.13	94.13
VIT_16s0100g00880.t01	Wine grape	cytosol	93.88	93.88
VIT_16s0100g00920.t01	Wine grape	cytosol	93.88	93.88
VIT_16s0100g01020.t01	Wine grape	cytosol	93.88	93.88
VIT_16s0100g00840.t01	Wine grape	cytosol	93.37	93.37
VIT_16s0100g01040.t01	Wine grape	cytosol	93.37	93.37
VIT_16s0100g00860.t01	Wine grape	cytosol	84.69	93.26
VIT_10s0042g00910.t01	Wine grape	cytosol	84.95	90.98
VIT_16s0100g01130.t01	Wine grape	cytosol	97.96	90.14
VIT_14s0068g00920.t01	Wine grape	cytosol	77.04	76.84
VIT_14s0068g00930.t01	Wine grape	cytosol	76.79	76.59
VIT_05s0136g00260.t01	Wine grape	cytosol	74.74	75.32
VIT_16s0022g01020.t01	Wine grape	cytosol	54.85	69.81
GSMUA_Achr6P08170_001	Banana	cytosol	63.52	67.66
GSMUA_Achr6P08180_001	Banana	cytosol	64.03	62.75
TraesCS7B01G462200.1	Wheat	cytosol	46.94	61.54
VIT_15s0021g02170.t01	Wine grape	cytosol	40.82	41.13
VIT_03s0038g01460.t01	Wine grape	cytosol	40.56	40.56
VIT_16s0100g01110.t01	Wine grape	cytosol, mitochondrion, nucleus	83.42	6.31
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.57	0.74

Protein Annotations

KEGG:00941+2.3.1.74	EntrezGene:100261661	wikigene:100261661	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	ProteinID:AAT84755
ProteinID:AAT84755.1	ProteinID:AAT84763	ProteinID:AAT84763.1	ProteinID:AAT84776	ProteinID:AAT84776.1	ProteinID:AAT84784
ProteinID:AAT84784.1	ProteinID:AAT84803	ProteinID:AAT84803.1	ProteinID:AAT84816	ProteinID:AAT84816.1	ProteinID:AAT84832
ProteinID:AAT84832.1	ProteinID:AAT84834	ProteinID:AAT84834.1	ProteinID:AAT84917	ProteinID:AAT84917.1	ProteinID:AAT84920
ProteinID:AAT84920.1	ProteinID:AAT84929	ProteinID:AAT84929.1	ProteinID:AAT84943	ProteinID:AAT84943.1	ProteinID:AAT84958
ProteinID:AAT84958.1	ProteinID:AAT84972	ProteinID:AAT84972.1	ProteinID:AAT84984	ProteinID:AAT84984.1	ProteinID:AAT84986
ProteinID:AAT84986.1	ProteinID:AAT84989	ProteinID:AAT84989.1	ProteinID:ABJ97068	ProteinID:ABJ97068.1	EMBL:AY670088
EMBL:AY670096	EMBL:AY670109	EMBL:AY670117	EMBL:AY670136	EMBL:AY670149	EMBL:AY670165
EMBL:AY670167	EMBL:AY670250	EMBL:AY670253	EMBL:AY670262	EMBL:AY670276	EMBL:AY670291
EMBL:AY670305	EMBL:AY670317	EMBL:AY670319	EMBL:AY670322	ProteinID:CCB56426	ProteinID:CCB56426.1
InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS	InterPro:Chalcone/stilbene_synthase_N	EMBL:DQ987600	UniProt:F6HP20	EMBL:FN596000
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	EntrezGene:LOC100261661	wikigene:LOC100261661	PFAM:PF00195
PFAM:PF02797	PIRSF:PIRSF000451	ScanProsite:PS00441	PANTHER:PTHR11877	PANTHER:PTHR11877:SF27	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI00015CE229	ArrayExpress:VIT_16s0100g01140	EnsemblPlantsGene:VIT_16s0100g01140	EnsemblPlants:VIT_16s0100g01140.t01
RefSeq:XP_002263881	RefSeq:XP_002263881.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr16:-:16627367..16629171

Molecular Weight (calculated)

42778.7 Da

IEP (calculated)

6.673

GRAVY (calculated)

-0.040

Length

392 amino acids

Sequence
(BLAST)

001: MASVEEIRNA QRAKGPATIL AIGTATPDHC VYQSDYADYY FRVTKSEHMT ELKKKFNRIC DKSMIKKRYI HLTEEMLEEH PNIGAYMAPS LNIRQEIITA
101: EVPKLGKEAA LKALKEWGQP KSKITHLVFC TTSGVEMPGA DYKLANLLGL ETSVRRVMLY HQGCYAGGTV LRTAKDLAEN NAGARVLVVC SEITVVTFRG
201: PSEDALDSLV GQALFGDGSA AVIVGSDPDI SIERPLFQLV SAAQTFIPNS AGAIAGNLRE VGLTFHLWPN VPTLISENIE KCLTKAFDPL GISDWNSLFW
301: IAHPGGPAIL DAVEAKLNLE KKKLEATRHV LSEYGNMSSA CVLFILDEMR KKSLKGEKAT TGEGLDWGVL FGFGPGLTIE TVVLHSIPTV TN

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.