Factsheet for VIT_16s0100g01030.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

cytosol: 29589146
vacuole: 29589146

gfp PMID: 29589146 doi

F Ma, L Wang, Y Wang

College of Horticulture, Northwest A & F University, No. 3 Taicheng Road, Yangling, 712100, Shaanxi, People's Republic of China., College of Horticulture, Northwest A & F University, No. 3 Taicheng Road, Yangling, 712100, Shaanxi, People's Republic of China. wangyj@nwsuaf.edu.cn., Key Laboratory of Horticultural Plant Biology and Germplasm Innovation in Northwest China, Ministry of Agriculture, Yangling, 712100, Shaanxi, People's Republic of China., Key Laboratory of Horticultural Plant Biology and Germplasm Innovation in Northwest China, Ministry of Agriculture, Yangling, 712100, Shaanxi, People's Republic of China. wangyj@nwsuaf.edu.cn., State Key Laboratory of Crop Stress Biology in Arid Areas, Northwest A&F University, Yangling, 712100, Shaanxi, People's Republic of China., State Key Laboratory of Crop Stress Biology in Arid Areas, Northwest A&F University, Yangling, 712100, Shaanxi, People's Republic of China. wangyj@nwsuaf.edu.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0100g00770.t01	Wine grape	cytosol	98.72	98.72
VIT_16s0100g01140.t01	Wine grape	cytosol	98.21	98.21
VIT_16s0100g01010.t01	Wine grape	cytosol	98.21	98.21
VIT_16s0100g01170.t01	Wine grape	cytosol	97.96	97.96
VIT_16s0100g00830.t01	Wine grape	cytosol	97.96	97.96
VIT_16s0100g00750.t01	Wine grape	cytosol	97.96	97.96
VIT_16s0100g00990.t01	Wine grape	cytosol	97.7	97.7
VIT_16s0100g00910.t01	Wine grape	cytosol	97.7	97.7
VIT_16s0100g00780.t01	Wine grape	cytosol	97.7	97.7
VIT_16s0100g01120.t01	Wine grape	cytosol	97.7	97.7
VIT_16s0100g01150.t01	Wine grape	cytosol	97.19	97.19
VIT_16s0100g00800.t01	Wine grape	cytosol	76.02	94.01
VIT_10s0042g00930.t01	Wine grape	cytosol	93.88	93.88
VIT_10s0042g00920.t01	Wine grape	cytosol	93.88	93.88
VIT_16s0100g00930.t01	Wine grape	cytosol	93.62	93.62
VIT_16s0100g00920.t01	Wine grape	cytosol	93.62	93.62
VIT_16s0100g00900.t01	Wine grape	cytosol	93.62	93.62
VIT_16s0100g01000.t01	Wine grape	cytosol	93.37	93.37
VIT_16s0100g00850.t01	Wine grape	cytosol	93.37	93.37
VIT_16s0100g00940.t01	Wine grape	cytosol	93.37	93.37
VIT_16s0100g01040.t01	Wine grape	cytosol	93.37	93.37
VIT_16s0100g00840.t01	Wine grape	cytosol	93.11	93.11
VIT_16s0100g01020.t01	Wine grape	cytosol	93.11	93.11
VIT_16s0100g00880.t01	Wine grape	cytosol	92.6	92.6
VIT_16s0100g00860.t01	Wine grape	cytosol	83.93	92.42
VIT_10s0042g00910.t01	Wine grape	cytosol	84.44	90.44
VIT_16s0100g01130.t01	Wine grape	cytosol	97.19	89.44
VIT_14s0068g00930.t01	Wine grape	cytosol	76.79	76.59
VIT_14s0068g00920.t01	Wine grape	cytosol	76.79	76.59
VIT_05s0136g00260.t01	Wine grape	cytosol	74.49	75.06
VIT_16s0022g01020.t01	Wine grape	cytosol	54.59	69.48
GSMUA_Achr6P08170_001	Banana	cytosol	63.27	67.39
GSMUA_Achr6P08180_001	Banana	cytosol	64.03	62.75
TraesCS7B01G462200.1	Wheat	cytosol	46.68	61.2
VIT_15s0021g02170.t01	Wine grape	cytosol	40.56	40.87
VIT_03s0038g01460.t01	Wine grape	cytosol	40.31	40.31
VIT_16s0100g01110.t01	Wine grape	cytosol, mitochondrion, nucleus	81.63	6.18
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.57	0.74

Protein Annotations

KEGG:00941+2.3.1.74	EntrezGene:100217471	wikigene:100217471	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	ProteinID:AAT84795
ProteinID:AAT84795.1	ProteinID:AAT84796	ProteinID:AAT84796.1	ProteinID:AAT84800	ProteinID:AAT84800.1	ProteinID:AAT84812
ProteinID:AAT84812.1	ProteinID:AAT84822	ProteinID:AAT84822.1	ProteinID:AAT84861	ProteinID:AAT84861.1	ProteinID:AAT84921
ProteinID:AAT84921.1	ProteinID:AAT84963	ProteinID:AAT84963.1	ProteinID:ABV82966	ProteinID:ABV82966.1	ProteinID:ACO59459
ProteinID:ACO59459.1	ProteinID:AEB00551	ProteinID:AEB00551.1	ProteinID:AGI37812	ProteinID:AGI37812.1	EMBL:AY670128
EMBL:AY670129	EMBL:AY670133	EMBL:AY670145	EMBL:AY670155	EMBL:AY670194	EMBL:AY670254
EMBL:AY670296	ProteinID:CCB56433	ProteinID:CCB56433.1	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS	InterPro:Chalcone/stilbene_synthase_N
EMBL:EU156062	EMBL:FJ851185	EMBL:FN596000	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	GO:GO:0050350
EMBL:HQ399462	InterPro:IPR016039	EMBL:KC417318	UniProt:P51071	PFAM:PF00195	PFAM:PF02797
PIRSF:PIRSF000451	ScanProsite:PS00441	PANTHER:PTHR11877	PANTHER:PTHR11877:SF27	InterPro:Polyketide_synthase_type-III	EMBL:S63227
SUPFAM:SSF53901	EntrezGene:STS	wikigene:STS	InterPro:Thiolase-like	UniParc:UPI00015CE234	ArrayExpress:VIT_16s0100g01030
EnsemblPlantsGene:VIT_16s0100g01030	EnsemblPlants:VIT_16s0100g01030.t01	unigene:Vvi.25322	SEG:seg	:	:

Description

Stilbene synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P51071]

Coordinates

chr16:-:16507726..16509479

Molecular Weight (calculated)

42818.7 Da

IEP (calculated)

6.584

GRAVY (calculated)

-0.046

Length

392 amino acids

Sequence
(BLAST)

001: MASVEEIRNA QRAKGPATIL AIGTATPDHC VYQSDYADYY FRVTKSEHMT ELKKKFNRIC DKSMIKKRYI HLTEEMLEEH PNIGAYMAPS LNIRQEIITV
101: EVPKLGKEAA LKALKEWGQP KSKITHLVFC TTSGVEMPGA DYKLANLLGL ETSVRRVMLY HQGCYAGGTV LRTAKDLAEN NAGARVLVVC SEITVVTFRG
201: PSEDALDSLV GQALFGDGSA AVIVGSDPDV SIERPLFQLV SAAQTFIPNS AGAIAGNLRE VGLTFHLWPN VPTLISENVE KCLTQAFDPL GISDWNSLFW
301: IAHPGGPAIL DAVEAKLNLD KKKLEATRHV LSEYGNMSSA CVLFILDEMR KKSHKGEKAT TGEGLDWGVL FGFGPGLTIE TVVLHSIPMV TN

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.