Factsheet for VIT_16s0100g00990.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0100g01010.t01	Wine grape	cytosol	99.49	99.49
VIT_16s0100g00770.t01	Wine grape	cytosol	97.96	97.96
VIT_16s0100g01140.t01	Wine grape	cytosol	97.96	97.96
VIT_16s0100g00750.t01	Wine grape	cytosol	97.96	97.96
VIT_16s0100g01030.t01	Wine grape	cytosol	97.7	97.7
VIT_16s0100g01170.t01	Wine grape	cytosol	97.45	97.45
VIT_16s0100g00830.t01	Wine grape	cytosol	97.19	97.19
VIT_16s0100g01120.t01	Wine grape	cytosol	97.19	97.19
VIT_16s0100g00910.t01	Wine grape	cytosol	96.94	96.94
VIT_16s0100g00780.t01	Wine grape	cytosol	96.94	96.94
VIT_16s0100g01150.t01	Wine grape	cytosol	96.68	96.68
VIT_10s0042g00930.t01	Wine grape	cytosol	94.13	94.13
VIT_10s0042g00920.t01	Wine grape	cytosol	94.13	94.13
VIT_16s0100g00930.t01	Wine grape	cytosol	93.88	93.88
VIT_16s0100g00900.t01	Wine grape	cytosol	93.88	93.88
VIT_16s0100g00800.t01	Wine grape	cytosol	75.77	93.69
VIT_16s0100g00940.t01	Wine grape	cytosol	93.62	93.62
VIT_16s0100g00850.t01	Wine grape	cytosol	93.62	93.62
VIT_16s0100g01000.t01	Wine grape	cytosol	93.37	93.37
VIT_16s0100g01040.t01	Wine grape	cytosol	93.37	93.37
VIT_16s0100g00920.t01	Wine grape	cytosol	93.11	93.11
VIT_16s0100g00880.t01	Wine grape	cytosol	92.86	92.86
VIT_16s0100g01020.t01	Wine grape	cytosol	92.86	92.86
VIT_16s0100g00860.t01	Wine grape	cytosol	84.18	92.7
VIT_16s0100g00840.t01	Wine grape	cytosol	92.6	92.6
VIT_10s0042g00910.t01	Wine grape	cytosol	84.44	90.44
VIT_16s0100g01130.t01	Wine grape	cytosol	96.43	88.73
VIT_14s0068g00930.t01	Wine grape	cytosol	76.53	76.34
VIT_14s0068g00920.t01	Wine grape	cytosol	76.02	75.83
VIT_05s0136g00260.t01	Wine grape	cytosol	74.49	75.06
VIT_16s0022g01020.t01	Wine grape	cytosol	54.08	68.83
GSMUA_Achr6P08170_001	Banana	cytosol	62.5	66.58
GSMUA_Achr6P08180_001	Banana	cytosol	63.01	61.75
TraesCS7B01G462200.1	Wheat	cytosol	46.94	61.54
VIT_15s0021g02170.t01	Wine grape	cytosol	41.07	41.39
VIT_03s0038g01460.t01	Wine grape	cytosol	40.82	40.82
VIT_16s0100g01110.t01	Wine grape	cytosol, mitochondrion, nucleus	82.14	6.22
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.57	0.74

Protein Annotations

KEGG:00941+2.3.1.74	EntrezGene:100259169	wikigene:100259169	EntrezGene:100855299	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1
ProteinID:AAT84779	ProteinID:AAT84779.1	ProteinID:AAT84954	ProteinID:AAT84954.1	EMBL:AY670112	EMBL:AY670287
ProteinID:CCB56437	ProteinID:CCB56437.1	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS	InterPro:Chalcone/stilbene_synthase_N	UniProt:F6HP31
EMBL:FN596000	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	EntrezGene:LOC100259169	wikigene:LOC100259169
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	ScanProsite:PS00441	PANTHER:PTHR11877	PANTHER:PTHR11877:SF27
InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	TIGR:TC52746	InterPro:Thiolase-like	UniParc:UPI00015CE356	ArrayExpress:VIT_16s0100g00990
EnsemblPlantsGene:VIT_16s0100g00990	EnsemblPlants:VIT_16s0100g00990.t01	unigene:Vvi.24997	unigene:Vvi.25889	RefSeq:XP_002268842	RefSeq:XP_002268842.2
RefSeq:XP_003634068	RefSeq:XP_003634068.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr16:-:16466739..16468638

Molecular Weight (calculated)

42774.7 Da

IEP (calculated)

6.673

GRAVY (calculated)

-0.024

Length

392 amino acids

Sequence
(BLAST)

001: MASVEEIRNA QRAKGPATIL AIGTATPDHC VYQSDYADYY FRVTKSEHMT ALKKKFNRIC DKSMIKKRYI HLTEEMLEEH PNIGAYMAPS LNIRQEIITA
101: EVPKLGKEAA LKALKEWGQP KSKITHLVFC TTSGVEMPGA DYKLANLLGL EPSVRRVMLY HQGCYAGGTV LRTAKDLAEN NAGARVLVVC SEITVVTFRG
201: PSEDALDSLV GQALFGDGSA AVIVGSDPDI SIERPLFQLV SAAQTFIPNS AGAIAGNLRE VGLTFHLWPN VPTLISENIE KCLTQAFDPL GISDWNSLFW
301: IAHPGGPAIL DAVEAKLNLD KKKLEATRHV LSEYGNMSSA CVLFILDEMR RKSLKGERAS TGEGLDWGVL FGFGPGLTIE TVVLHSIPMV TN

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.