Factsheet for GSMUA_Achr6P08170_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P08180_001	Banana	cytosol	92.12	84.75
GSMUA_Achr6P16370_001	Banana	cytosol, mitochondrion, plastid	64.95	76.36
GSMUA_Achr6P10910_001	Banana	cytosol, mitochondrion	65.76	73.78
GSMUA_Achr10P...	Banana	cytosol	64.13	72.84
VIT_16s0100g00830.t01	Wine grape	cytosol	67.93	63.78
VIT_16s0100g00900.t01	Wine grape	cytosol	67.93	63.78
VIT_16s0100g01020.t01	Wine grape	cytosol	67.93	63.78
VIT_16s0100g01000.t01	Wine grape	cytosol	67.93	63.78
VIT_16s0100g00940.t01	Wine grape	cytosol	67.93	63.78
GSMUA_Achr10P...	Banana	mitochondrion	59.24	63.56
VIT_16s0100g00910.t01	Wine grape	cytosol	67.66	63.52
VIT_16s0100g01140.t01	Wine grape	cytosol	67.66	63.52
VIT_16s0100g01030.t01	Wine grape	cytosol	67.39	63.27
VIT_16s0100g01120.t01	Wine grape	cytosol	67.39	63.27
VIT_16s0100g01150.t01	Wine grape	cytosol	67.39	63.27
VIT_16s0100g01170.t01	Wine grape	cytosol	67.39	63.27
VIT_16s0100g00780.t01	Wine grape	cytosol	67.39	63.27
VIT_16s0100g00770.t01	Wine grape	cytosol	67.39	63.27
VIT_10s0042g00920.t01	Wine grape	cytosol	67.39	63.27
VIT_10s0042g00930.t01	Wine grape	cytosol	67.12	63.01
VIT_16s0100g01010.t01	Wine grape	cytosol	67.12	63.01
VIT_16s0100g00880.t01	Wine grape	cytosol	67.12	63.01
VIT_16s0100g00850.t01	Wine grape	cytosol	67.12	63.01
VIT_16s0100g00930.t01	Wine grape	cytosol	66.85	62.76
VIT_16s0100g01040.t01	Wine grape	cytosol	66.85	62.76
VIT_16s0100g00750.t01	Wine grape	cytosol	66.58	62.5
VIT_16s0100g00840.t01	Wine grape	cytosol	66.58	62.5
VIT_16s0100g00920.t01	Wine grape	cytosol	66.58	62.5
VIT_16s0100g00990.t01	Wine grape	cytosol	66.58	62.5
GSMUA_Achr11P...	Banana	mitochondrion	60.6	61.94
VIT_16s0100g00800.t01	Wine grape	cytosol	53.26	61.83
VIT_16s0100g00860.t01	Wine grape	cytosol	59.78	61.8
VIT_10s0042g00910.t01	Wine grape	cytosol	59.78	60.11
GSMUA_Achr3P22530_001	Banana	cytosol	50.0	59.16
GSMUA_Achr2P22970_001	Banana	mitochondrion	57.07	58.33
TraesCS7B01G462200.1	Wheat	cytosol	47.28	58.19
GSMUA_Achr6P08990_001	Banana	mitochondrion	53.53	57.77
GSMUA_Achr10P...	Banana	mitochondrion	57.34	57.65
VIT_16s0100g01130.t01	Wine grape	cytosol	66.58	57.51
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	50.82	57.01
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	56.52	56.83
GSMUA_Achr10P...	Banana	mitochondrion	55.71	56.47
GSMUA_Achr5P29740_001	Banana	cytosol, peroxisome, plastid	52.72	52.86
GSMUA_Achr3P01140_001	Banana	cytosol, peroxisome, plasma membrane	52.72	33.86
GSMUA_Achr5P17860_001	Banana	cytosol, nucleus, peroxisome	36.96	18.09
VIT_16s0100g01110.t01	Wine grape	cytosol, mitochondrion, nucleus	57.34	4.07

Protein Annotations

KEGG:00941+2.3.1.74	Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS	InterPro:Chalcone/stilbene_synthase_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:GSMUA_Achr6G08170_001	EnsemblPlants:GSMUA_Achr6P08170_001	EnsemblPlants:GSMUA_Achr6T08170_001	InterPro:IPR016039
UniProt:M0T566	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	ScanProsite:PS00441	PANTHER:PTHR11877
PANTHER:PTHR11877:SF44	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI000295CF77	SEG:seg

Description

Chalcone synthase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr6G08170_001]

Coordinates

chr6:-:5448636..5450145

Molecular Weight (calculated)

40966.5 Da

IEP (calculated)

7.617

GRAVY (calculated)

-0.143

Length

368 amino acids

Sequence
(BLAST)

001: MAKVEEIRRS QRAEGPATVL AIGTSNPDNV VYQADYPDYY FRITKSNHLP ELKQKFKRIC EKTMIRKRYM FLNEEILKAN PNIAEYMAPS MDVRRDILAV
101: EVPKLAKEAA VKAIEEWGHP KSRITHLVFC TTASFDSPGH DYQLVKLLGL SPSINRFTLS HHGCFAGGTV LRLAKDLAEN NRGARVLVVC SELTAVTFRG
201: ATETHLDNLR PLFQLVSASQ TLLPDSDGAI EGHLKEVGLT FHLLKDVPRI IAKNIEQNLV EAFESLGISD WNSIFWIVHP GGSAILDAME AKLGLEKEKL
301: KATRQVMTEY GNMYSACVLF ILDEMRKRSA EDGKATTGDG LEWGVLYGFG PGLTVETVVL RSVAISSR

Best Arabidopsis Sequence Match ( AT5G13930.1 )
(BLAST)

001: MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL

Arabidopsis Description

CHSTT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UKS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.