Factsheet for GSMUA_Achr3P22530_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P16370_001	Banana	cytosol, mitochondrion, plastid	57.88	57.51
GSMUA_Achr11P...	Banana	mitochondrion	61.74	53.33
GSMUA_Achr6P08170_001	Banana	cytosol	59.16	50.0
GSMUA_Achr2P22970_001	Banana	mitochondrion	56.91	49.17
GSMUA_Achr6P08990_001	Banana	mitochondrion	53.38	48.68
GSMUA_Achr10P...	Banana	mitochondrion	55.31	47.38
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	49.84	47.26
GSMUA_Achr10P...	Banana	cytosol	49.2	47.22
GSMUA_Achr10P...	Banana	mitochondrion	55.31	46.99
GSMUA_Achr6P10910_001	Banana	cytosol, mitochondrion	49.52	46.95
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	54.98	46.72
GSMUA_Achr5P29740_001	Banana	cytosol, peroxisome, plastid	53.7	45.5
GSMUA_Achr6P08180_001	Banana	cytosol	58.2	45.25
VIT_16s0022g01020.t01	Wine grape	cytosol	43.09	43.51
GSMUA_Achr10P...	Banana	mitochondrion	47.27	42.86
GSMUA_Achr3P01140_001	Banana	cytosol, peroxisome, plasma membrane	47.59	25.83
GSMUA_Achr5P17860_001	Banana	cytosol, nucleus, peroxisome	38.26	15.82

Protein Annotations

KEGG:00941+2.3.1.74	Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS	InterPro:Chalcone/stilbene_synthase_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:GSMUA_Achr3G22530_001	EnsemblPlants:GSMUA_Achr3P22530_001	EnsemblPlants:GSMUA_Achr3T22530_001	InterPro:IPR016039
UniProt:M0SGW9	PFAM:PF00195	PFAM:PF02797	ScanProsite:PS00441	PANTHER:PTHR11877	PANTHER:PTHR11877:SF27
InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI00029548C6	SEG:seg	:

Description

Chalcone synthase J [Source:GMGC_GENE;Acc:GSMUA_Achr3G22530_001]

Coordinates

chr3:-:23475149..23476458

Molecular Weight (calculated)

34144.5 Da

IEP (calculated)

9.196

GRAVY (calculated)

-0.199

Length

311 amino acids

Sequence
(BLAST)

001: MDQSCAAQSA SKIREIRREQ RADGPAAIMA IGTANPPNVI DQVNFADFYF RMTSSEDKQE LKEKFKLICD RTTVKNRYAH LTEEIVEQNP NLRNPTAPSL
101: ETRLRIMIEA VPNLGKEAAA KALKEWGQPK SMITHLVFCS GAGVDMPGAD YQLVKLLGLS PSVKRVMLYH LGCYGGGTVL RVAKDLAENN RGARVLVVNV
201: EITTMAIATQ TLLPESEGKI GGQLKESGLA IHLHRDTKLK LEPKKLQVTR RVLREFGNMS SATVFFVLDE TRKQSATEGW ATTGQGLEWG VLCGLGPGIT
301: VETVVLRSVP L

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.