Factsheet for GSMUA_Achr10P20600_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
vacuole 1
mitochondrion 6
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P22970_001	Banana	mitochondrion	87.88	88.61
GSMUA_Achr6P08990_001	Banana	mitochondrion	82.64	87.98
GSMUA_Achr10P...	Banana	mitochondrion	74.66	74.04
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	73.0	72.4
GSMUA_Achr5P29740_001	Banana	cytosol, peroxisome, plastid	71.9	71.12
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	62.53	69.21
GSMUA_Achr6P16370_001	Banana	cytosol, mitochondrion, plastid	52.34	60.7
GSMUA_Achr6P10910_001	Banana	cytosol, mitochondrion	53.44	59.15
GSMUA_Achr10P...	Banana	cytosol	52.07	58.33
GSMUA_Achr11P...	Banana	mitochondrion	55.92	56.39
GSMUA_Achr6P08170_001	Banana	cytosol	56.47	55.71
GSMUA_Achr3P22530_001	Banana	cytosol	47.38	55.31
GSMUA_Achr10P...	Banana	mitochondrion	50.14	53.06
GSMUA_Achr6P08180_001	Banana	cytosol	55.92	50.75
VIT_16s0022g01020.t01	Wine grape	cytosol	41.6	49.03
GSMUA_Achr3P01140_001	Banana	cytosol, peroxisome, plasma membrane	52.89	33.51
GSMUA_Achr5P17860_001	Banana	cytosol, nucleus, peroxisome	38.29	18.48

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
EnsemblPlantsGene:GSMUA_Achr10G20600_001	EnsemblPlants:GSMUA_Achr10P20600_001	EnsemblPlants:GSMUA_Achr10T20600_001	InterPro:IPR016039	UniProt:M0RJY5	PFAM:PF00195
PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF27	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901
InterPro:Thiolase-like	UniParc:UPI0002950063	SEG:seg	:	:	:

Description

Chalcone synthase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G20600_001]

Coordinates

chr10:+:26510804..26512717

Molecular Weight (calculated)

40635.2 Da

IEP (calculated)

8.448

GRAVY (calculated)

-0.148

Length

363 amino acids

Sequence
(BLAST)

001: MSSLHAMRKA QRARGPATIM AIGTANPPNL YEQSTYPDYY FRVTNSEHMQ ELKHKFRRIC EKTMVKRRYL YLTEEILKER PKLCAYMEPS FDDRQDIVVE
101: EVPKLAKEAA AKAIKEWGRS VSDITHLVFC SISGIDMPGA DYRLAKLLGL PLSVNRIMIY SQACHMGAAM LRIAKDLAEN NKGARVLVVS CEITVLSFRG
201: PDEHDFQALA GQAGFGDGAA AVISEKAVGG HLREVGLTFY FFSQLPMIIA DNIEHSLTEA FKPLGIANWN DIFWVAHPGN WAIMDAIERK LGLQPEKLST
301: ARHVFSEYGN MQSATVYFVL DEVRKRSVTQ ERSTTGDGLR WGVLFGFGPG LSIETVVLRG VPR

Best Arabidopsis Sequence Match ( AT4G34850.1 )
(BLAST)

001: MGSIDAAVLG SEKKSNPGKA TILALGKAFP HQLVMQEYLV DGYFKTTKCD DPELKQKLTR LCKTTTVKTR YVVMSEEILK KYPELAIEGG STVTQRLDIC
101: NDAVTEMAVE ASRACIKNWG RSISDITHVV YVSSSEARLP GGDLYLAKGL GLSPDTHRVL LYFVGCSGGV AGLRVAKDIA ENNPGSRVLL ATSETTIIGF
201: KPPSVDRPYD LVGVALFGDG AGAMIIGSDP DPICEKPLFE LHTAIQNFLP ETEKTIDGRL TEQGINFKLS RELPQIIEDN VENFCKKLIG KAGLAHKNYN
301: QMFWAVHPGG PAILNRIEKR LNLSPEKLSP SRRALMDYGN ASSNSIVYVL EYMLEESKKV RNMNEEENEW GLILAFGPGV TFEGIIARNL DV

Arabidopsis Description

PKSBPSKB [Source:UniProtKB/TrEMBL;Acc:A0A178UTW2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.