Factsheet for GSMUA_Achr10P20630_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	95.08	95.08
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	78.69	87.8
GSMUA_Achr5P29740_001	Banana	cytosol, peroxisome, plastid	80.6	80.38
GSMUA_Achr2P22970_001	Banana	mitochondrion	77.6	78.89
GSMUA_Achr10P...	Banana	mitochondrion	74.04	74.66
GSMUA_Achr6P08990_001	Banana	mitochondrion	69.13	74.19
GSMUA_Achr6P16370_001	Banana	cytosol, mitochondrion, plastid	53.55	62.62
GSMUA_Achr6P10910_001	Banana	cytosol, mitochondrion	53.28	59.45
GSMUA_Achr10P...	Banana	cytosol	51.37	58.02
GSMUA_Achr6P08170_001	Banana	cytosol	57.65	57.34
GSMUA_Achr11P...	Banana	mitochondrion	54.92	55.83
GSMUA_Achr3P22530_001	Banana	cytosol	46.99	55.31
GSMUA_Achr6P08180_001	Banana	cytosol	57.92	53.0
GSMUA_Achr10P...	Banana	mitochondrion	48.09	51.31
VIT_16s0022g01020.t01	Wine grape	cytosol	43.17	51.3
GSMUA_Achr3P01140_001	Banana	cytosol, peroxisome, plasma membrane	53.01	33.86
GSMUA_Achr5P17860_001	Banana	cytosol, nucleus, peroxisome	35.79	17.42

Protein Annotations

KEGG:00061+2.3.1.180	Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:ACP_syn_III_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746
GO:GO:0016747	EnsemblPlantsGene:GSMUA_Achr10G20630_001	EnsemblPlants:GSMUA_Achr10P20630_001	EnsemblPlants:GSMUA_Achr10T20630_001	InterPro:IPR016039	UniProt:M0RJY8
PFAM:PF00195	PFAM:PF08541	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF44	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI000296CEF2	SEG:seg	:	:

Description

Chalcone synthase 1A [Source:GMGC_GENE;Acc:GSMUA_Achr10G20630_001]

Coordinates

chr10:+:26525917..26527166

Molecular Weight (calculated)

40740.4 Da

IEP (calculated)

6.992

GRAVY (calculated)

-0.127

Length

366 amino acids

Sequence
(BLAST)

001: MASVHPFRKA QRARGPATIM AIGTANPPNL YEQSTFPDFY FRVTNSDHMP ELKEKFRRIC GKTMIKKRYM HLTEEVLKDK PGMCSYMDPS LDERQDIVVE
101: EVPRLAKEAA AKAIEEWGRD KSDVTHLVFC STSGVDMPGA DYRLVKLLGL PLSVNRIMLY SQACHIGAQM LRIAKDIAEN NKDARVLVVA CELNTLIFRG
201: PDERDFLSLA GQAAFADGAA AVTVPDCERA VGGHLKEIGL TFHFMNQLPM LIANNLENCL LEAFKPLGIT DWNEVFWVSH PGNWGIMDAI ERKVGLKQEK
301: LRSSRHVFGE YGNMMSATVL FVMDDVRKRS AAEGRATTGD GLEWGVLFGF GPGLSIETVV LRSVAL

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.