Factsheet for GSMUA_Achr2P22970_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	mitochondrion	88.61	87.88
GSMUA_Achr6P08990_001	Banana	mitochondrion	82.5	87.1
GSMUA_Achr10P...	Banana	mitochondrion	78.89	77.6
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	77.5	76.23
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	67.22	73.78
GSMUA_Achr5P29740_001	Banana	cytosol, peroxisome, plastid	75.0	73.57
GSMUA_Achr6P16370_001	Banana	cytosol, mitochondrion, plastid	53.33	61.34
GSMUA_Achr10P...	Banana	cytosol	53.33	59.26
GSMUA_Achr6P10910_001	Banana	cytosol, mitochondrion	53.89	59.15
GSMUA_Achr11P...	Banana	mitochondrion	58.33	58.33
GSMUA_Achr6P08170_001	Banana	cytosol	58.33	57.07
GSMUA_Achr3P22530_001	Banana	cytosol	49.17	56.91
GSMUA_Achr10P...	Banana	mitochondrion	51.11	53.64
GSMUA_Achr6P08180_001	Banana	cytosol	58.06	52.25
VIT_16s0022g01020.t01	Wine grape	cytosol	43.61	50.97
GSMUA_Achr3P01140_001	Banana	cytosol, peroxisome, plasma membrane	56.67	35.6
GSMUA_Achr5P17860_001	Banana	cytosol, nucleus, peroxisome	38.89	18.62

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
EnsemblPlantsGene:GSMUA_Achr2G22970_001	EnsemblPlants:GSMUA_Achr2P22970_001	EnsemblPlants:GSMUA_Achr2T22970_001	InterPro:IPR016039	UniProt:M0SAD8	PFAM:PF00195
PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF44	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901
InterPro:Thiolase-like	UniParc:UPI000296E828	:	:	:	:

Description

Chalcone synthase [Source:GMGC_GENE;Acc:GSMUA_Achr2G22970_001]

Coordinates

chr2:+:21851584..21853225

Molecular Weight (calculated)

40186.6 Da

IEP (calculated)

7.640

GRAVY (calculated)

-0.144

Length

360 amino acids

Sequence
(BLAST)

001: MASLHALRKT QRAQGPATIM AIGTANPPNL YEQSTYPDYY FRVTNSEHKP DLKHKFRRMC EKTMVKRRYL HLTEEILKER PKLCSYMEPS FDDRQDIVVE
101: EVPKLAKEAA TKAIKEWGRS KSDITHLVFC SISGIDMPGA DYRLAKLLGL PLSVNRIMLY SQACHMGAAM LRIAKDLAEN NKGARVLVVS CEITVLSFRG
201: PDEHDFEALA GQAGFVTVPE SEKAVGGHLR EVGLTFHFFN QLPLIIADNI GNSLADAFKP LGITDWNEVF WVAHPGNWAI MDAIESKLGL LPEKLSTARH
301: VFTEYGNMQS ATVYFVMDEV RKRSVVEGRA TTGDGLQWGV LFGFGPGLSI ETVVLRSVPL

Best Arabidopsis Sequence Match ( AT4G34850.1 )
(BLAST)

001: MGSIDAAVLG SEKKSNPGKA TILALGKAFP HQLVMQEYLV DGYFKTTKCD DPELKQKLTR LCKTTTVKTR YVVMSEEILK KYPELAIEGG STVTQRLDIC
101: NDAVTEMAVE ASRACIKNWG RSISDITHVV YVSSSEARLP GGDLYLAKGL GLSPDTHRVL LYFVGCSGGV AGLRVAKDIA ENNPGSRVLL ATSETTIIGF
201: KPPSVDRPYD LVGVALFGDG AGAMIIGSDP DPICEKPLFE LHTAIQNFLP ETEKTIDGRL TEQGINFKLS RELPQIIEDN VENFCKKLIG KAGLAHKNYN
301: QMFWAVHPGG PAILNRIEKR LNLSPEKLSP SRRALMDYGN ASSNSIVYVL EYMLEESKKV RNMNEEENEW GLILAFGPGV TFEGIIARNL DV

Arabidopsis Description

PKSBPSKB [Source:UniProtKB/TrEMBL;Acc:A0A178UTW2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.