Factsheet for GSMUA_Achr10P20620_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	mitochondrion	95.08	95.08
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	80.87	90.24
GSMUA_Achr5P29740_001	Banana	cytosol, peroxisome, plastid	79.78	79.56
GSMUA_Achr2P22970_001	Banana	mitochondrion	76.23	77.5
GSMUA_Achr6P08990_001	Banana	mitochondrion	69.4	74.49
GSMUA_Achr10P...	Banana	mitochondrion	72.4	73.0
GSMUA_Achr6P16370_001	Banana	cytosol, mitochondrion, plastid	52.46	61.34
GSMUA_Achr6P10910_001	Banana	cytosol, mitochondrion	53.28	59.45
GSMUA_Achr10P...	Banana	cytosol	50.82	57.41
GSMUA_Achr6P08170_001	Banana	cytosol	56.83	56.52
GSMUA_Achr3P22530_001	Banana	cytosol	46.72	54.98
GSMUA_Achr11P...	Banana	mitochondrion	53.83	54.72
GSMUA_Achr6P08180_001	Banana	cytosol	56.83	52.0
GSMUA_Achr10P...	Banana	mitochondrion	47.81	51.02
VIT_16s0022g01020.t01	Wine grape	cytosol	42.9	50.97
GSMUA_Achr3P01140_001	Banana	cytosol, peroxisome, plasma membrane	53.01	33.86
GSMUA_Achr5P17860_001	Banana	cytosol, nucleus, peroxisome	36.07	17.55

Protein Annotations

KEGG:00061+2.3.1.180	Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:ACP_syn_III_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747
EnsemblPlantsGene:GSMUA_Achr10G20620_001	EnsemblPlants:GSMUA_Achr10P20620_001	EnsemblPlants:GSMUA_Achr10T20620_001	InterPro:IPR016039	UniProt:M0RJY7	PFAM:PF00195
PFAM:PF08541	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF44	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901
InterPro:Thiolase-like	UniParc:UPI0002964DE7	SEG:seg	:	:	:

Description

Chalcone synthase 1A [Source:GMGC_GENE;Acc:GSMUA_Achr10G20620_001]

Coordinates

chr10:+:26521067..26522334

Molecular Weight (calculated)

40775.5 Da

IEP (calculated)

6.933

GRAVY (calculated)

-0.108

Length

366 amino acids

Sequence
(BLAST)

001: MVSIDAFRKA QRPQGPATIM AIGTANPPNL YEQSTFPDFY FRVTNSDHMP ELKEKFRRIC GKTMIKKRYM HLTEEVLKQK PGMCSYMDPS FDERQEIVVE
101: EVPRLAKEAA AKAIEEWGRD KSGITHLVFC STSGIDMPGA DYRLVKLLGL PLSVNRIMLY SQACHIGAQI LRIAKDIAEN NKDARVLVVA CELNTLIFRG
201: PDERDFLSLA GQAAFADGAA AVTVPDCERA VGGHLKEIGL TFHFMNQLPM LISNNLENCL LEAFKPLGIT DWNEVFWVSH PGNWGIMDAI EKKVGLKQEK
301: LRSSRHVFGE YGNMMSATVL FVMDDVRRRS AAEGRATTGD GLEWGVLFGF GPGLTIETVV LRSVAI

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.