Factsheet for GSMUA_Achr11P26230_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 4
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P22530_001	Banana	cytosol	53.33	61.74
GSMUA_Achr6P08170_001	Banana	cytosol	61.94	60.6
GSMUA_Achr6P16370_001	Banana	cytosol, mitochondrion, plastid	51.94	59.74
GSMUA_Achr6P10910_001	Banana	cytosol, mitochondrion	54.17	59.45
GSMUA_Achr10P...	Banana	cytosol	52.5	58.33
GSMUA_Achr2P22970_001	Banana	mitochondrion	58.33	58.33
GSMUA_Achr6P08990_001	Banana	mitochondrion	53.89	56.89
GSMUA_Achr10P...	Banana	mitochondrion	56.39	55.92
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	50.28	55.18
GSMUA_Achr10P...	Banana	mitochondrion	55.83	54.92
VIT_16s0022g01020.t01	Wine grape	cytosol	46.94	54.87
GSMUA_Achr6P08180_001	Banana	cytosol	60.83	54.75
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	54.72	53.83
GSMUA_Achr5P29740_001	Banana	cytosol, peroxisome, plastid	54.72	53.68
GSMUA_Achr10P...	Banana	mitochondrion	50.28	52.77
GSMUA_Achr3P01140_001	Banana	cytosol, peroxisome, plasma membrane	50.56	31.76
GSMUA_Achr5P17860_001	Banana	cytosol, nucleus, peroxisome	39.17	18.75

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00941+2.3.1.74	Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:ACP_syn_III_C	InterPro:Chalcone/stilbene_synthase_AS
InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:GSMUA_Achr11G26230_001	EnsemblPlants:GSMUA_Achr11P26230_001	EnsemblPlants:GSMUA_Achr11T26230_001
InterPro:IPR016039	UniProt:M0RVK3	PFAM:PF00195	PFAM:PF08541	PIRSF:PIRSF000451	ScanProsite:PS00441
PANTHER:PTHR11877	PANTHER:PTHR11877:SF43	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI0002957770

Description

Chalcone synthase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G26230_001]

Coordinates

chr11:-:25085161..25086831

Molecular Weight (calculated)

39710.8 Da

IEP (calculated)

6.946

GRAVY (calculated)

-0.162

Length

360 amino acids

Sequence
(BLAST)

001: MASFRASRKA QSSDGPATIL AIGTANPRNL VDQLAYPDFY FRVTNADDRQ ELKDKFKRIC KTSTVKRRFI HLNEEILKAN PTVCTPGAPS LEARQDILIE
101: ELPKLGKEAA ERAIKEWGRP KSMITHVIFC STAGFDMPGA DYQLIKLLGL SPSVRRVMLY HVGCFAGASA LRIAKDLAEN NRGARVLVVC AETTAITFQA
201: PDEHNIYNLI ASAAQTLLPE SEGTIKGHLR DVGLDLHLRR DVPKLIAENI EETLVNAFEP LGISDWNSLF WIAHPGGPAI LDQIESTLGL KPEKLRATRS
301: VLRDYGNMSS ATVIFIMDEM RKQSAKEERE SSGEGLEWGV LYGFGPGLTV ESVVLHSVPL

Best Arabidopsis Sequence Match ( AT4G34850.1 )
(BLAST)

001: MGSIDAAVLG SEKKSNPGKA TILALGKAFP HQLVMQEYLV DGYFKTTKCD DPELKQKLTR LCKTTTVKTR YVVMSEEILK KYPELAIEGG STVTQRLDIC
101: NDAVTEMAVE ASRACIKNWG RSISDITHVV YVSSSEARLP GGDLYLAKGL GLSPDTHRVL LYFVGCSGGV AGLRVAKDIA ENNPGSRVLL ATSETTIIGF
201: KPPSVDRPYD LVGVALFGDG AGAMIIGSDP DPICEKPLFE LHTAIQNFLP ETEKTIDGRL TEQGINFKLS RELPQIIEDN VENFCKKLIG KAGLAHKNYN
301: QMFWAVHPGG PAILNRIEKR LNLSPEKLSP SRRALMDYGN ASSNSIVYVL EYMLEESKKV RNMNEEENEW GLILAFGPGV TFEGIIARNL DV

Arabidopsis Description

PKSBPSKB [Source:UniProtKB/TrEMBL;Acc:A0A178UTW2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.