Factsheet for VIT_16s0100g00770.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0100g01120.t01	Wine grape	cytosol	98.98	98.98
VIT_16s0100g00830.t01	Wine grape	cytosol	98.72	98.72
VIT_16s0100g01030.t01	Wine grape	cytosol	98.72	98.72
VIT_16s0100g00910.t01	Wine grape	cytosol	98.47	98.47
VIT_16s0100g01140.t01	Wine grape	cytosol	98.47	98.47
VIT_16s0100g01010.t01	Wine grape	cytosol	98.47	98.47
VIT_16s0100g00750.t01	Wine grape	cytosol	98.21	98.21
VIT_16s0100g01170.t01	Wine grape	cytosol	97.96	97.96
VIT_16s0100g00780.t01	Wine grape	cytosol	97.96	97.96
VIT_16s0100g00990.t01	Wine grape	cytosol	97.96	97.96
VIT_16s0100g01150.t01	Wine grape	cytosol	97.96	97.96
VIT_16s0100g00800.t01	Wine grape	cytosol	77.04	95.27
VIT_16s0100g00900.t01	Wine grape	cytosol	94.39	94.39
VIT_16s0100g00920.t01	Wine grape	cytosol	94.39	94.39
VIT_16s0100g00930.t01	Wine grape	cytosol	94.39	94.39
VIT_16s0100g01000.t01	Wine grape	cytosol	94.13	94.13
VIT_10s0042g00930.t01	Wine grape	cytosol	94.13	94.13
VIT_10s0042g00920.t01	Wine grape	cytosol	94.13	94.13
VIT_16s0100g00850.t01	Wine grape	cytosol	94.13	94.13
VIT_16s0100g00940.t01	Wine grape	cytosol	94.13	94.13
VIT_16s0100g01040.t01	Wine grape	cytosol	93.88	93.88
VIT_16s0100g00840.t01	Wine grape	cytosol	93.88	93.88
VIT_16s0100g01020.t01	Wine grape	cytosol	93.62	93.62
VIT_16s0100g00880.t01	Wine grape	cytosol	93.37	93.37
VIT_16s0100g00860.t01	Wine grape	cytosol	84.69	93.26
VIT_10s0042g00910.t01	Wine grape	cytosol	84.69	90.71
VIT_16s0100g01130.t01	Wine grape	cytosol	97.45	89.67
VIT_14s0068g00920.t01	Wine grape	cytosol	76.79	76.59
VIT_14s0068g00930.t01	Wine grape	cytosol	76.53	76.34
VIT_05s0136g00260.t01	Wine grape	cytosol	74.23	74.81
VIT_16s0022g01020.t01	Wine grape	cytosol	54.59	69.48
GSMUA_Achr6P08170_001	Banana	cytosol	63.27	67.39
GSMUA_Achr6P08180_001	Banana	cytosol	64.03	62.75
TraesCS7B01G462200.1	Wheat	cytosol	46.94	61.54
VIT_15s0021g02170.t01	Wine grape	cytosol	40.82	41.13
VIT_03s0038g01460.t01	Wine grape	cytosol	40.56	40.56
VIT_16s0100g01110.t01	Wine grape	cytosol, mitochondrion, nucleus	82.14	6.22
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.57	0.74

Protein Annotations

KEGG:00941+2.3.1.74	EntrezGene:100245181	wikigene:100245181	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	ProteinID:AAT84806
ProteinID:AAT84806.1	ProteinID:AAT84824	ProteinID:AAT84824.1	ProteinID:AAT84829	ProteinID:AAT84829.1	ProteinID:AAT84833
ProteinID:AAT84833.1	ProteinID:AAT84846	ProteinID:AAT84846.1	ProteinID:AAT84847	ProteinID:AAT84847.1	ProteinID:AAT84905
ProteinID:AAT84905.1	ProteinID:AAT84931	ProteinID:AAT84931.1	ProteinID:ABJ97071	ProteinID:ABJ97071.1	EMBL:AM485293
EMBL:AY670139	EMBL:AY670157	EMBL:AY670162	EMBL:AY670166	EMBL:AY670179	EMBL:AY670180
EMBL:AY670238	EMBL:AY670264	ProteinID:CAN81926	ProteinID:CAN81926.1	ProteinID:CBI31811	ProteinID:CBI31811.3
InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS	InterPro:Chalcone/stilbene_synthase_N	UniProt:D7TMT8	EMBL:DQ987603	EMBL:FN596000
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	GO:GO:0050350	InterPro:IPR016039	EntrezGene:LOC100245181	wikigene:LOC100245181
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	ScanProsite:PS00441	PANTHER:PTHR11877	PANTHER:PTHR11877:SF27
InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	TIGR:TC52741	TIGR:TC60712	InterPro:Thiolase-like	UniParc:UPI00015CCA4E
ArrayExpress:VIT_16s0100g00770	EnsemblPlantsGene:VIT_16s0100g00770	EnsemblPlants:VIT_16s0100g00770.t01	RefSeq:XP_002278385	RefSeq:XP_002278385.1	SEG:seg

Description

No Description!

Coordinates

chr16:+:16268744..16270610

Molecular Weight (calculated)

42780.7 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.033

Length

392 amino acids

Sequence
(BLAST)

001: MASIEEIRNA QRAKGPATIL AIGTATPDHC VYQSDYADYY FRVTKSEHMT ELKKKFNRIC DKSMIKKRYI HLTEEMLEEH PNIGAYMAPS LNIRQEIITA
101: EVPKLGKEAA LKALKEWGQP KSKITHLVFC TTSGVEMPGA DYKLANLLGL ETSVRRVMLY HQGCYAGGTV LRTAKDLAEN NAGARVLVVC SEITVVTFRG
201: PSEDALDSLV GQALFGDGSA AVIVGSDPDV SIERPLFQLV SAAQTFIPNS AGAIAGNLRE VGLTFHLWPN VPTLISENIE KCLTQAFDPL GISDWNSLFW
301: IAHPGGPAIL DAVEAKLNLD KKKLEATRHV LSEYGNMSSA CVLFILDEMR KKSLKGEKAT TGEGLDWGVL FGFGPGLTIE TVVLHSIPMV SN

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.