Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G124000.1 | Wheat | plastid | 86.39 | 87.89 |
| HORVU5Hr1G039960.1 | Barley | plastid | 85.37 | 85.37 |
| TraesCS5D01G131900.1 | Wheat | plastid | 86.39 | 85.23 |
| VIT_18s0041g01190.t01 | Wine grape | endoplasmic reticulum | 11.22 | 71.74 |
| Os07t0264800-01 | Rice | plastid | 62.93 | 62.93 |
| EER96202 | Sorghum | plastid | 62.59 | 61.95 |
| Zm00001d019343_P001 | Maize | plastid | 61.22 | 61.86 |
| GSMUA_Achr3P21890_001 | Banana | cytosol | 37.41 | 58.2 |
| Bra003900.1-P | Field mustard | plastid | 41.5 | 49.0 |
| CDX68289 | Canola | plastid | 41.5 | 49.0 |
| CDY36666 | Canola | plastid | 40.48 | 47.79 |
| AT1G72030.1 | Thale cress | plastid | 41.16 | 47.27 |
| KRH44932 | Soybean | plastid | 41.84 | 45.05 |
| PGSC0003DMT400037096 | Potato | cytosol, plastid | 42.52 | 44.33 |
| KRH23754 | Soybean | plastid | 40.48 | 43.91 |
| Solyc03g025710.2.1 | Tomato | cytosol | 40.82 | 42.7 |
| VIT_18s0041g01220.t01 | Wine grape | cytosol | 40.82 | 41.81 |
| PGSC0003DMT400084957 | Potato | cytosol, plastid | 34.69 | 38.49 |
| PGSC0003DMT400018842 | Potato | plastid | 34.35 | 37.0 |
| Solyc11g020000.1.1 | Tomato | plastid | 24.49 | 34.29 |
| VIT_18s0041g01150.t01 | Wine grape | mitochondrion | 17.01 | 30.49 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G123600.1 | EnsemblPlantsGene:TraesCS5B01G123600 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | InterPro:GNAT_dom | InterPro:IPR000182 |
| PANTHER:PTHR42919 | PANTHER:PTHR42919:SF7 | PFAM:PF00583 | PFscan:PS51186 | SEG:seg | SUPFAM:SSF55729 |
| TIGR:cd04301 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:222750498..222758552
Molecular Weight (calculated)
32637.4 Da
IEP (calculated)
10.123
GRAVY (calculated)
-0.258
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPAAATMAV LRASPLPPQP LPSSSSTPQS QRSPRGSITA AALSRTSPHP PPLKTGCRGS AKKILLAGRR RFPCLPTKQE VGAVGGAEEE RYLAREAGWG
101: VRRMGRVGEE MRRVALVQAE AFHVPVALFN DFFFDFFKAE VLAALIYKLR NSPPDRYACL VAEEAGEPSQ SQAPFEKIIG VVDCTVQDEG DILRNLQGVQ
201: EYFYVSGIAV LPSFRRRKVG TALLKACEVL ALEWRQRFMA LRAYEDDSSA RGLYAKAGYR VVSRDPEWVT WVGRRRRVLM VKDLPVHDAQ IQQQ
101: VRRMGRVGEE MRRVALVQAE AFHVPVALFN DFFFDFFKAE VLAALIYKLR NSPPDRYACL VAEEAGEPSQ SQAPFEKIIG VVDCTVQDEG DILRNLQGVQ
201: EYFYVSGIAV LPSFRRRKVG TALLKACEVL ALEWRQRFMA LRAYEDDSSA RGLYAKAGYR VVSRDPEWVT WVGRRRRVLM VKDLPVHDAQ IQQQ
001: MGHLPQSLYS AAGPKFPYPG SSGLGVDQRK LTWSRFPVFL RCASTESLTS LTQNNAAEIE LKYLVSQHGW DVRRLNRDDE DEIRRVSLVQ AEAFHIPLAL
101: FDDFFFMFFQ AEVLSALLYK LKNSPPDRYA CLVAEQTSET ETLSSSSVVG VVDVTAQTES SVLRYFPGVE EYLYVSGLAV SKSQRRKKMA STLLKACDVL
201: CYLWGFKLLA LRAYEDDAAA RNLYSNAGYS VVETDPLWTS TWIGRKRRVL MSKRFS
101: FDDFFFMFFQ AEVLSALLYK LKNSPPDRYA CLVAEQTSET ETLSSSSVVG VVDVTAQTES SVLRYFPGVE EYLYVSGLAV SKSQRRKKMA STLLKACDVL
201: CYLWGFKLLA LRAYEDDAAA RNLYSNAGYS VVETDPLWTS TWIGRKRRVL MSKRFS
Arabidopsis Description
Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C7G6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.