Factsheet for Solyc03g025710.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g092930.1.1
Solyc04g077210.2.1
Solyc06g073150.2.1
Solyc08g078700.2.1
Solyc11g013370.1.1
Solyc11g017300.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G72030.1	Solyc06g073150.2.1	AT1G22920.1	21798944
AT1G72030.1	Solyc11g017300.1.1	AT1G22920.1	21798944
AT1G72030.1	Solyc02g092930.1.1	AT2G23290.1	21798944
AT1G72030.1	Solyc11g013370.1.1	AT2G44950.1	21798944
AT1G72030.1	Solyc04g077210.2.1	AT4G08150.1	21798944
AT1G72030.1	Solyc08g078700.2.1	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037096	Potato	cytosol, plastid	92.53	92.2
VIT_18s0041g01190.t01	Wine grape	endoplasmic reticulum	11.03	67.39
GSMUA_Achr3P21890_001	Banana	cytosol	38.08	56.61
Solyc11g020000.1.1	Tomato	plastid	39.15	52.38
VIT_18s0041g01220.t01	Wine grape	cytosol	49.82	48.78
CDY36666	Canola	plastid	42.35	47.79
KRH44932	Soybean	plastid	45.91	47.25
Bra003900.1-P	Field mustard	plastid	41.64	46.99
CDX68289	Canola	plastid	41.64	46.99
KRH23754	Soybean	plastid	43.42	45.02
AT1G72030.1	Thale cress	plastid	40.93	44.92
Os07t0264800-01	Rice	plastid	43.06	41.16
TraesCS5A01G124000.1	Wheat	plastid	41.99	40.83
TraesCS5B01G123600.1	Wheat	plastid	42.7	40.82
Zm00001d019343_P001	Maize	plastid	41.64	40.21
TraesCS5D01G131900.1	Wheat	plastid	42.35	39.93
HORVU5Hr1G039960.1	Barley	plastid	41.64	39.8
EER96202	Sorghum	plastid	41.99	39.73
VIT_18s0041g01150.t01	Wine grape	mitochondrion	20.28	34.76
HORVU6Hr1G023720.1	Barley	plastid	16.73	26.55

Protein Annotations

EnsemblPlants:Solyc03g025710.2.1	EnsemblPlantsGene:Solyc03g025710.2	Gene3D:3.40.630.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008080	GO:GO:0016740	InterPro:Acyl_CoA_acyltransferase
InterPro:GNAT_dom	InterPro:IPR000182	PANTHER:PTHR42919	PANTHER:PTHR42919:SF7	PFAM:PF00583	PFscan:PS51186
SUPFAM:SSF55729	UniParc:UPI0002768CA8	UniProt:K4BF44	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr3:-:3119897..3122096

Molecular Weight (calculated)

32561.1 Da

IEP (calculated)

8.847

GRAVY (calculated)

-0.291

Length

281 amino acids

Sequence
(BLAST)

001: MAQCQWQPHF QTRLKEDVSW KCRGISINKY KDKSKGIRNW RKRLQMPQCC SSSFPVSSTT WRGLEVGLIN SEGKQRGDCE VGCFVNENGW KVRRMIETEQ
101: EMRNVAAVQA QAFYEPLLIF NDLFFQFFQA EVLSGLLYRL KNSPPDRYVC LVAEASSDTP EVEQDLVGVV DAMVYRDTDV LQFLPGATEY IYISGIAVLN
201: NFRRRKVATA LLKACDVLAR FWRFEYLVLR AYEDDFGARQ LYTNAGYIVV SGDAPWKTTW IGRRRRVLMV KQVSPESTYI Y

Best Arabidopsis Sequence Match ( AT1G72030.1 )
(BLAST)

001: MGHLPQSLYS AAGPKFPYPG SSGLGVDQRK LTWSRFPVFL RCASTESLTS LTQNNAAEIE LKYLVSQHGW DVRRLNRDDE DEIRRVSLVQ AEAFHIPLAL
101: FDDFFFMFFQ AEVLSALLYK LKNSPPDRYA CLVAEQTSET ETLSSSSVVG VVDVTAQTES SVLRYFPGVE EYLYVSGLAV SKSQRRKKMA STLLKACDVL
201: CYLWGFKLLA LRAYEDDAAA RNLYSNAGYS VVETDPLWTS TWIGRKRRVL MSKRFS

Arabidopsis Description

Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C7G6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.