CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH23958
KRH28419
KRH30315
KRH39841
KRH52586
KRH57983
KRH61471
KRH61926
KRH75261
KRH77058

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G72030.1	KRH52586	AT1G22920.1	21798944
AT1G72030.1	KRH61926	AT1G22920.1	21798944
AT1G72030.1	KRH28419	AT2G23290.1	21798944
AT1G72030.1	KRH57983	AT2G23290.1	21798944
AT1G72030.1	KRH77058	AT2G23290.1	21798944
AT1G72030.1	KRH30315	AT2G44950.1	21798944
AT1G72030.1	KRH75261	AT2G44950.1	21798944
AT1G72030.1	KRH61471	AT4G08150.1	21798944
AT1G72030.1	KRH23958	AT4G25200.1	21798944
AT1G72030.1	KRH39841	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44932	Soybean	plastid	85.98	85.35
VIT_18s0041g01190.t01	Wine grape	endoplasmic reticulum	11.44	67.39
GSMUA_Achr3P21890_001	Banana	cytosol	40.59	58.2
Bra003900.1-P	Field mustard	plastid	49.82	54.22
CDX68289	Canola	plastid	49.82	54.22
CDY36666	Canola	plastid	49.45	53.82
AT1G72030.1	Thale cress	plastid	50.55	53.52
VIT_18s0041g01220.t01	Wine grape	cytosol	54.98	51.92
PGSC0003DMT400037096	Potato	cytosol, plastid	46.49	44.68
Solyc03g025710.2.1	Tomato	cytosol	45.02	43.42
PGSC0003DMT400018842	Potato	plastid	42.07	41.76
TraesCS5A01G124000.1	Wheat	plastid	44.28	41.52
TraesCS5D01G131900.1	Wheat	plastid	44.65	40.6
TraesCS5B01G123600.1	Wheat	plastid	43.91	40.48
HORVU5Hr1G039960.1	Barley	plastid	43.54	40.14
PGSC0003DMT400084957	Potato	cytosol, plastid	38.75	39.62
Zm00001d019343_P001	Maize	plastid	42.44	39.52
Os07t0264800-01	Rice	plastid	41.33	38.1
EER96202	Sorghum	plastid	41.7	38.05
VIT_18s0041g01150.t01	Wine grape	mitochondrion	21.4	35.37
Solyc11g020000.1.1	Tomato	plastid	25.46	32.86
HORVU6Hr1G023720.1	Barley	plastid	17.34	26.55

Protein Annotations

EntrezGene:100800276	Gene3D:3.40.630.30	MapMan:35.2	EMBL:ACUP02007160	InterPro:Acyl_CoA_acyltransferase	EnsemblPlantsGene:GLYMA_12G002000
InterPro:GNAT_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008080	GO:GO:0016740	UniProt:I1LNP3	InterPro:IPR000182	EnsemblPlants:KRH23754
ProteinID:KRH23754	ProteinID:KRH23754.1	PFAM:PF00583	PFscan:PS51186	PANTHER:PTHR42919	PANTHER:PTHR42919:SF7
SUPFAM:SSF55729	UniParc:UPI000233D5DC	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:155525..157569

Molecular Weight (calculated)

30796.3 Da

IEP (calculated)

9.949

GRAVY (calculated)

-0.255

Length

271 amino acids

Sequence
(BLAST)

001: MAHLLASNPN ASQKLTFSNL GYYGVRRGSR TKGSCYRVGR KRRGGLVLQC SSTTDQDVRL QIESGSIGKL KQHFEYLVCE YGWRVRRLFE NADEIKKASH
101: VQAEAFHVPV SLFNELFFQF FQAEVLSGLL YKLKNSPPNR YACLVAEPAI NDPDSPKQLV GVIDVTVLRD QNVLQHLPPE AEEYLYISGI AVSKTFRRKK
201: IATALLKACE MLSILWGFEF LALRAYEEDL GARKLYANAG YQVVSRDPPW TSNWIGRKCR VLMIKRTSLP K

Best Arabidopsis Sequence Match ( AT1G72030.1 )
(BLAST)

001: MGHLPQSLYS AAGPKFPYPG SSGLGVDQRK LTWSRFPVFL RCASTESLTS LTQNNAAEIE LKYLVSQHGW DVRRLNRDDE DEIRRVSLVQ AEAFHIPLAL
101: FDDFFFMFFQ AEVLSALLYK LKNSPPDRYA CLVAEQTSET ETLSSSSVVG VVDVTAQTES SVLRYFPGVE EYLYVSGLAV SKSQRRKKMA STLLKACDVL
201: CYLWGFKLLA LRAYEDDAAA RNLYSNAGYS VVETDPLWTS TWIGRKRRVL MSKRFS

Arabidopsis Description

Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C7G6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.