Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G124000.1 | Wheat | plastid | 88.44 | 89.97 |
| TraesCS5D01G131900.1 | Wheat | plastid | 91.16 | 89.93 |
| TraesCS5B01G123600.1 | Wheat | plastid | 85.37 | 85.37 |
| VIT_18s0041g01190.t01 | Wine grape | endoplasmic reticulum | 11.22 | 71.74 |
| Os07t0264800-01 | Rice | plastid | 63.95 | 63.95 |
| Zm00001d019343_P001 | Maize | plastid | 61.9 | 62.54 |
| EER96202 | Sorghum | plastid | 62.24 | 61.62 |
| GSMUA_Achr3P21890_001 | Banana | cytosol | 36.73 | 57.14 |
| Bra003900.1-P | Field mustard | plastid | 40.14 | 47.39 |
| CDX68289 | Canola | plastid | 40.14 | 47.39 |
| CDY36666 | Canola | plastid | 39.46 | 46.59 |
| AT1G72030.1 | Thale cress | plastid | 40.48 | 46.48 |
| HORVU6Hr1G023720.1 | Barley | plastid | 27.55 | 45.76 |
| KRH44932 | Soybean | plastid | 41.16 | 44.32 |
| KRH23754 | Soybean | plastid | 40.14 | 43.54 |
| PGSC0003DMT400037096 | Potato | cytosol, plastid | 41.5 | 43.26 |
| VIT_18s0041g01220.t01 | Wine grape | cytosol | 40.82 | 41.81 |
| Solyc03g025710.2.1 | Tomato | cytosol | 39.8 | 41.64 |
| PGSC0003DMT400084957 | Potato | cytosol, plastid | 34.69 | 38.49 |
| PGSC0003DMT400018842 | Potato | plastid | 34.01 | 36.63 |
| Solyc11g020000.1.1 | Tomato | plastid | 24.49 | 34.29 |
| VIT_18s0041g01150.t01 | Wine grape | mitochondrion | 18.03 | 32.32 |
Protein Annotations
| EMBL:AK359134 | EnsemblPlants:HORVU5Hr1G039960.1 | EnsemblPlantsGene:HORVU5Hr1G039960 | Gene3D:3.40.630.30 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008080 | GO:GO:0016740 | InterPro:Acyl_CoA_acyltransferase | InterPro:GNAT_dom | InterPro:IPR000182 | PANTHER:PTHR42919 |
| PANTHER:PTHR42919:SF7 | PFAM:PF00583 | PFscan:PS51186 | SEG:seg | SUPFAM:SSF55729 | UniParc:UPI0002005CAA |
| UniProt:F2D5H4 | MapMan:35.2 | : | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D5H4]
Coordinates
chrchr5H:-:291816219..291894970
Molecular Weight (calculated)
32620.7 Da
IEP (calculated)
9.737
GRAVY (calculated)
-0.137
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPPAATMAV LRAPPLPPHP LPSSSSTPQS QRSPRGSITA AALSRTSSLP PPLKTGCLGS AKKILLAGRG RLPCLPTKHQ VGAVGGAEEE RYLAMEAEWG
101: VRRMGRIGEE MRRVAFVQAE AFHVPVALFN DFFFDFFKAE VLAALIYKLR NSPPDRYACL VAEEADELLQ SRAPFEKIIG VVDCTVQDEG DILRNLQGVQ
201: EYFYVSGIAV LPSFRRRKVG TALLKACEVL ALEWRQRFMA LMAYEDDSSA RGLYAKAGYR VVSRDPGWVT WVGRRRRVLM VKELPVHDAQ IQQQ
101: VRRMGRIGEE MRRVAFVQAE AFHVPVALFN DFFFDFFKAE VLAALIYKLR NSPPDRYACL VAEEADELLQ SRAPFEKIIG VVDCTVQDEG DILRNLQGVQ
201: EYFYVSGIAV LPSFRRRKVG TALLKACEVL ALEWRQRFMA LMAYEDDSSA RGLYAKAGYR VVSRDPGWVT WVGRRRRVLM VKELPVHDAQ IQQQ
001: MGHLPQSLYS AAGPKFPYPG SSGLGVDQRK LTWSRFPVFL RCASTESLTS LTQNNAAEIE LKYLVSQHGW DVRRLNRDDE DEIRRVSLVQ AEAFHIPLAL
101: FDDFFFMFFQ AEVLSALLYK LKNSPPDRYA CLVAEQTSET ETLSSSSVVG VVDVTAQTES SVLRYFPGVE EYLYVSGLAV SKSQRRKKMA STLLKACDVL
201: CYLWGFKLLA LRAYEDDAAA RNLYSNAGYS VVETDPLWTS TWIGRKRRVL MSKRFS
101: FDDFFFMFFQ AEVLSALLYK LKNSPPDRYA CLVAEQTSET ETLSSSSVVG VVDVTAQTES SVLRYFPGVE EYLYVSGLAV SKSQRRKKMA STLLKACDVL
201: CYLWGFKLLA LRAYEDDAAA RNLYSNAGYS VVETDPLWTS TWIGRKRRVL MSKRFS
Arabidopsis Description
Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C7G6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.