CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
peroxisome 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH23958
KRH28419
KRH30315
KRH39841
KRH52586
KRH57983
KRH61471
KRH61926
KRH75261
KRH77058

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G72030.1	KRH52586	AT1G22920.1	21798944
AT1G72030.1	KRH61926	AT1G22920.1	21798944
AT1G72030.1	KRH28419	AT2G23290.1	21798944
AT1G72030.1	KRH57983	AT2G23290.1	21798944
AT1G72030.1	KRH77058	AT2G23290.1	21798944
AT1G72030.1	KRH30315	AT2G44950.1	21798944
AT1G72030.1	KRH75261	AT2G44950.1	21798944
AT1G72030.1	KRH61471	AT4G08150.1	21798944
AT1G72030.1	KRH23958	AT4G25200.1	21798944
AT1G72030.1	KRH39841	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23754	Soybean	plastid	85.35	85.98
VIT_18s0041g01190.t01	Wine grape	endoplasmic reticulum	11.36	67.39
GSMUA_Achr3P21890_001	Banana	cytosol	41.03	59.26
Bra003900.1-P	Field mustard	plastid	49.45	54.22
CDX68289	Canola	plastid	49.45	54.22
CDY36666	Canola	plastid	49.08	53.82
VIT_18s0041g01220.t01	Wine grape	cytosol	56.04	53.31
AT1G72030.1	Thale cress	plastid	49.82	53.12
PGSC0003DMT400037096	Potato	cytosol, plastid	48.72	47.16
Solyc03g025710.2.1	Tomato	cytosol	47.25	45.91
TraesCS5A01G124000.1	Wheat	plastid	45.42	42.91
PGSC0003DMT400084957	Potato	cytosol, plastid	41.03	42.26
TraesCS5D01G131900.1	Wheat	plastid	45.79	41.95
TraesCS5B01G123600.1	Wheat	plastid	45.05	41.84
PGSC0003DMT400018842	Potato	plastid	41.76	41.76
Zm00001d019343_P001	Maize	plastid	43.96	41.24
HORVU5Hr1G039960.1	Barley	plastid	44.32	41.16
EER96202	Sorghum	plastid	42.49	39.06
VIT_18s0041g01150.t01	Wine grape	mitochondrion	23.08	38.41
Os07t0264800-01	Rice	plastid	41.03	38.1
Solyc11g020000.1.1	Tomato	plastid	26.74	34.76
HORVU6Hr1G023720.1	Barley	plastid	16.85	25.99

Protein Annotations

Gene3D:3.40.630.30	MapMan:35.2	EMBL:ACUP02004977	InterPro:Acyl_CoA_acyltransferase	EnsemblPlantsGene:GLYMA_08G240100	InterPro:GNAT_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008080	GO:GO:0016740	UniProt:I1KWA3	InterPro:IPR000182	EnsemblPlants:KRH44932	ProteinID:KRH44932
ProteinID:KRH44932.1	PFAM:PF00583	PFscan:PS51186	PANTHER:PTHR42919	PANTHER:PTHR42919:SF7	SUPFAM:SSF55729
UniParc:UPI0002337DFD	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:20474884..20476670

Molecular Weight (calculated)

31100.5 Da

IEP (calculated)

9.572

GRAVY (calculated)

-0.261

Length

273 amino acids

Sequence
(BLAST)

001: MAHLLASNPN ASQKLICSNL EYYGVRSRRG SRTTSACYRV GRKRRCGLVL QCSSTTDQDV RLQIENGSSG KLKQQFEYLV CEYGWKVRRL FENADEIKKA
101: SQVQAEAFHV PVSLFNDLFF QFFQAEVLSG LLYKLKNSPP NRYACLVAET AIDDPDSAKQ LVGVIDVTVL RDQNVLQHLP PEAEEYLYIS GIAVSKTFRR
201: RKIATALLKA CDMLSILWGF EFLALRAYEE DLGARKLYTN AGYQVVSRDP PWTSNWIGRK CRVLMIKRTS FSK

Best Arabidopsis Sequence Match ( AT1G72030.1 )
(BLAST)

001: MGHLPQSLYS AAGPKFPYPG SSGLGVDQRK LTWSRFPVFL RCASTESLTS LTQNNAAEIE LKYLVSQHGW DVRRLNRDDE DEIRRVSLVQ AEAFHIPLAL
101: FDDFFFMFFQ AEVLSALLYK LKNSPPDRYA CLVAEQTSET ETLSSSSVVG VVDVTAQTES SVLRYFPGVE EYLYVSGLAV SKSQRRKKMA STLLKACDVL
201: CYLWGFKLLA LRAYEDDAAA RNLYSNAGYS VVETDPLWTS TWIGRKRRVL MSKRFS

Arabidopsis Description

Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C7G6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.