CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88892
EER89430
EER89431
EER90950
EER91090
EER95833
EER98550
KXG19616
KXG27287
OQU75612
OQU75930
OQU76071
OQU85385
OQU90921
OQU91064

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G72030.1	KXG27287	AT1G22920.1	21798944
AT1G72030.1	EER98550	AT2G23290.1	21798944
AT1G72030.1	EER88892	AT2G44950.1	21798944
AT1G72030.1	EER90950	AT4G08150.1	21798944
AT1G72030.1	EER91090	AT4G08150.1	21798944
AT1G72030.1	EER95833	AT4G08150.1	21798944
AT1G72030.1	OQU90921	AT4G08150.1	21798944
AT1G72030.1	OQU91064	AT4G08150.1	21798944
AT1G72030.1	EER89430	AT4G25200.1	21798944
AT1G72030.1	EER89431	AT4G25200.1	21798944
AT1G72030.1	KXG19616	AT4G25200.1	21798944
AT1G72030.1	OQU75612	AT4G25200.1	21798944
AT1G72030.1	OQU75930	AT4G25200.1	21798944
AT1G72030.1	OQU76071	AT4G25200.1	21798944
AT1G72030.1	OQU85385	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019343_P001	Maize	plastid	73.06	74.57
VIT_18s0041g01190.t01	Wine grape	endoplasmic reticulum	10.77	69.57
Os07t0264800-01	Rice	plastid	65.99	66.67
TraesCS5A01G124000.1	Wheat	plastid	61.62	63.32
TraesCS5B01G123600.1	Wheat	plastid	61.95	62.59
HORVU5Hr1G039960.1	Barley	plastid	61.62	62.24
TraesCS5D01G131900.1	Wheat	plastid	61.95	61.74
GSMUA_Achr3P21890_001	Banana	cytosol	37.04	58.2
Bra003900.1-P	Field mustard	plastid	38.72	46.18
CDX68289	Canola	plastid	38.72	46.18
AT1G72030.1	Thale cress	plastid	39.06	45.31
CDY36666	Canola	plastid	37.71	44.98
VIT_18s0041g01220.t01	Wine grape	cytosol	41.75	43.21
PGSC0003DMT400037096	Potato	cytosol, plastid	40.74	42.91
KRH44932	Soybean	plastid	39.06	42.49
Solyc03g025710.2.1	Tomato	cytosol	39.73	41.99
KRH23754	Soybean	plastid	38.05	41.7
PGSC0003DMT400084957	Potato	cytosol, plastid	33.67	37.74
PGSC0003DMT400018842	Potato	plastid	34.01	37.0
HORVU6Hr1G023720.1	Barley	plastid	20.88	35.03
Solyc11g020000.1.1	Tomato	plastid	23.91	33.81
VIT_18s0041g01150.t01	Wine grape	mitochondrion	16.5	29.88

Protein Annotations

Gene3D:3.40.630.30	MapMan:35.2	EntrezGene:8084589	InterPro:Acyl_CoA_acyltransferase	UniProt:C5X3G0	EnsemblPlants:EER96202
ProteinID:EER96202	ProteinID:EER96202.1	InterPro:GNAT_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008080	GO:GO:0016740	InterPro:IPR000182
PFAM:PF00583	PFscan:PS51186	PANTHER:PTHR42919	PANTHER:PTHR42919:SF7	EnsemblPlantsGene:SORBI_3002G102200	SUPFAM:SSF55729
UniParc:UPI0001A83AF4	RefSeq:XP_002459681.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:11736942..11739096

Molecular Weight (calculated)

32951.6 Da

IEP (calculated)

9.549

GRAVY (calculated)

-0.298

Length

297 amino acids

Sequence
(BLAST)

001: MAVLRASPPF LPQPLSRPSQ SQSKRRPTAC RGVAATVVRP GPAPSRSRSG AGGVHGCRAK KGLLAARGRR QRVPCLPATE AGVGAAGVAR EDDEDDDEYL
101: AREAGWGVRL MGRVGEEMRR VAQVQAQAFH VPVALFDDFF FDFFKAEVLS ALIYRVRNSP PDRYACLVAE EAEAADQLSK APYERIVGVV DCTVQDEDDI
201: LKQLQGVDEY LYVSGIAVLP SFRRRKVGTA LLKACESLGL KWRHRFMVLR AYEDDDGARG LYAKAGYRVV SRDPDWVTWV GRRRRVVMIK ELPVHDI

Best Arabidopsis Sequence Match ( AT1G72030.1 )
(BLAST)

001: MGHLPQSLYS AAGPKFPYPG SSGLGVDQRK LTWSRFPVFL RCASTESLTS LTQNNAAEIE LKYLVSQHGW DVRRLNRDDE DEIRRVSLVQ AEAFHIPLAL
101: FDDFFFMFFQ AEVLSALLYK LKNSPPDRYA CLVAEQTSET ETLSSSSVVG VVDVTAQTES SVLRYFPGVE EYLYVSGLAV SKSQRRKKMA STLLKACDVL
201: CYLWGFKLLA LRAYEDDAAA RNLYSNAGYS VVETDPLWTS TWIGRKRRVL MSKRFS

Arabidopsis Description

Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C7G6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.