Factsheet for Bra003900.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000638.1-P
Bra004879.1-P
Bra012351.1-P
Bra013872.1-P
Bra024548.1-P
Bra032176.1-P
Bra040332.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G72030.1	Bra012351.1-P	AT1G22920.1	21798944
AT1G72030.1	Bra024548.1-P	AT1G22920.1	21798944
AT1G72030.1	Bra032176.1-P	AT2G23290.1	21798944
AT1G72030.1	Bra004879.1-P	AT2G44950.1	21798944
AT1G72030.1	Bra040332.1-P	AT2G44950.1	21798944
AT1G72030.1	Bra000638.1-P	AT4G08150.1	21798944
AT1G72030.1	Bra013872.1-P	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68289	Canola	plastid	99.6	99.6
AT1G72030.1	Thale cress	plastid	85.54	83.2
VIT_18s0041g01190.t01	Wine grape	endoplasmic reticulum	12.45	67.39
GSMUA_Achr3P21890_001	Banana	cytosol	41.77	55.03
KRH23754	Soybean	plastid	54.22	49.82
KRH44932	Soybean	plastid	54.22	49.45
VIT_18s0041g01220.t01	Wine grape	cytosol	52.21	45.3
TraesCS5A01G124000.1	Wheat	plastid	50.2	43.25
PGSC0003DMT400037096	Potato	cytosol, plastid	48.19	42.55
Solyc03g025710.2.1	Tomato	cytosol	46.99	41.64
TraesCS5B01G123600.1	Wheat	plastid	49.0	41.5
Zm00001d019343_P001	Maize	plastid	48.19	41.24
Os07t0264800-01	Rice	plastid	48.59	41.16
TraesCS5D01G131900.1	Wheat	plastid	48.19	40.27
HORVU5Hr1G039960.1	Barley	plastid	47.39	40.14
EER96202	Sorghum	plastid	46.18	38.72
PGSC0003DMT400018842	Potato	plastid	41.37	37.73
PGSC0003DMT400084957	Potato	cytosol, plastid	37.75	35.47
Solyc11g020000.1.1	Tomato	plastid	27.31	32.38
HORVU6Hr1G023720.1	Barley	plastid	21.69	30.51
VIT_18s0041g01150.t01	Wine grape	mitochondrion	20.08	30.49

Protein Annotations

EnsemblPlants:Bra003900.1	EnsemblPlants:Bra003900.1-P	EnsemblPlantsGene:Bra003900	Gene3D:3.40.630.30	GO:GO:0003674	GO:GO:0003824
GO:GO:0008080	GO:GO:0016740	InterPro:Acyl_CoA_acyltransferase	InterPro:GNAT_dom	InterPro:IPR000182	PANTHER:PTHR42919
PANTHER:PTHR42919:SF7	PFAM:PF00583	PFscan:PS51186	SEG:seg	SUPFAM:SSF55729	UniParc:UPI000254181B
UniProt:M4CI67	MapMan:35.2	:	:	:	:

Description

AT1G72030 (E=6e-098) | GCN5-related N-acetyltransferase (GNAT) family protein

Coordinates

chrA07:-:15631567..15632772

Molecular Weight (calculated)

28101.6 Da

IEP (calculated)

9.054

GRAVY (calculated)

-0.231

Length

249 amino acids

Sequence
(BLAST)

001: MAHLPQSLYS AARPEFPYPG KSSQPKWSRF PGIVRCASTE SLTSLTQNAA ELELKYMVSQ HGWGVRRLRR DDEEEIRRVS LVQAEAFHIP LALFNDFFFL
101: FFQAEVLSGL LYKLKNSPPD RYACLVAEKA GEADTSSSSS VVGVVDITVQ TENSVLRHFP GEEEYLYVSG LAVSKAQRRK KMASTLLKAC DVICYLWGFK
201: LLALRAYEDD AAARNLYSNA GYSVVESDPP WTSTWIGRKR RVLMTKRIS

Best Arabidopsis Sequence Match ( AT1G72030.1 )
(BLAST)

001: MGHLPQSLYS AAGPKFPYPG SSGLGVDQRK LTWSRFPVFL RCASTESLTS LTQNNAAEIE LKYLVSQHGW DVRRLNRDDE DEIRRVSLVQ AEAFHIPLAL
101: FDDFFFMFFQ AEVLSALLYK LKNSPPDRYA CLVAEQTSET ETLSSSSVVG VVDVTAQTES SVLRYFPGVE EYLYVSGLAV SKSQRRKKMA STLLKACDVL
201: CYLWGFKLLA LRAYEDDAAA RNLYSNAGYS VVETDPLWTS TWIGRKRRVL MSKRFS

Arabidopsis Description

Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C7G6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.