Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 2
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS6D01G402500.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G12060.1 | TraesCS6D01G402500.1 | AT5G02500.1 | 16003391 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G070830.1 | Barley | plastid | 91.84 | 96.26 |
| TraesCS6D01G263100.1 | Wheat | plastid | 93.37 | 94.82 |
| Zm00001d017861_P001 | Maize | cytosol | 69.9 | 69.54 |
| EES07356 | Sorghum | cytosol | 73.47 | 68.9 |
| Zm00001d051689_P001 | Maize | cytosol | 69.9 | 64.93 |
| Os02t0719700-01 | Rice | cytosol | 69.9 | 64.32 |
| KRH11525 | Soybean | plastid | 34.69 | 37.99 |
| Solyc04g014740.1.1 | Tomato | cytosol | 17.86 | 35.35 |
| KRH36541 | Soybean | plastid | 33.67 | 34.92 |
| VIT_00s0187g00330.t01 | Wine grape | cytosol | 17.35 | 34.69 |
| PGSC0003DMT400060695 | Potato | cytosol | 35.71 | 33.33 |
| GSMUA_Achr7P20350_001 | Banana | plastid | 41.33 | 33.06 |
| VIT_00s0187g00290.t01 | Wine grape | mitochondrion | 34.69 | 31.34 |
| AT1G12060.1 | Thale cress | cytosol | 34.18 | 31.16 |
| CDY31236 | Canola | cytosol | 32.65 | 30.33 |
| Bra016795.1-P | Field mustard | cytosol | 32.65 | 30.05 |
| CDY21029 | Canola | cytosol | 32.14 | 29.58 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G282600.1 | EnsemblPlantsGene:TraesCS6A01G282600 | Gene3D:1.20.58.120 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0051087 | InterPro:BAG_dom_sf | InterPro:BAG_domain | InterPro:IPR000048 | InterPro:IPR003103 | InterPro:IPR036533 |
| InterPro:IQ_motif_EF-hand-BS | ncoils:Coil | PANTHER:PTHR33322 | PANTHER:PTHR33322:SF6 | PFAM:PF02179 | PFscan:PS50096 |
| PFscan:PS51035 | SEG:seg | SMART:SM00264 | SUPFAM:SSF63491 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6A:+:513764075..513764665
Molecular Weight (calculated)
21016.9 Da
IEP (calculated)
10.967
GRAVY (calculated)
-0.252
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSYHYSSAS QFFFAAGDPG PGPSPAARKP ARTVRIPVTT PQDAAAARIQ AAFRSRRVRR HVAAVRAADA EATRLERLLR RQETVDAVRG DDRERARFSE
101: ALMAVLLRLD AVPGHDPAVR EARRAVSRRV VGLQEVFDSV LAAPEADTYG VPASLAQVLE GIWGVGEAPA APPPPAAAAA EEEARRSGWG RFFGVL
101: ALMAVLLRLD AVPGHDPAVR EARRAVSRRV VGLQEVFDSV LAAPEADTYG VPASLAQVLE GIWGVGEAPA APPPPAAAAA EEEARRSGWG RFFGVL
001: MKRSRKFSSS TTTTTVIHTF YNDHTTPPAT KEIPIETPLP ATKANVKTNA TAAAARIQSG YRSYRIRNLY KKISSINREA NRVQSIIQRQ ETVDAIRSDE
101: KERLRMNETL MALLLKLDSV PGLDPTIREA RRKVSRKIVG MQEILDSISE TKDEIQWWNY NDLGGVDSGQ GGGAWPLYWE EAVEEEMCRE RGGEEMERFC
201: AQYLGFRCFQ RFLRE
101: KERLRMNETL MALLLKLDSV PGLDPTIREA RRKVSRKIVG MQEILDSISE TKDEIQWWNY NDLGGVDSGQ GGGAWPLYWE EAVEEEMCRE RGGEEMERFC
201: AQYLGFRCFQ RFLRE
Arabidopsis Description
BAG5BAG5 [Source:UniProtKB/TrEMBL;Acc:A0A178WFD4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.