Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra009583.1-P | |
| Bra035909.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G12060.1 | Bra009583.1-P | AT5G02500.1 | 16003391 |
| AT1G12060.1 | Bra035909.1-P | AT5G02500.1 | 16003391 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21029 | Canola | cytosol | 99.53 | 99.53 |
| CDY31236 | Canola | cytosol | 91.55 | 92.42 |
| AT1G12060.1 | Thale cress | cytosol | 82.63 | 81.86 |
| VIT_00s0187g00330.t01 | Wine grape | cytosol | 30.05 | 65.31 |
| Solyc04g014740.1.1 | Tomato | cytosol | 27.7 | 59.6 |
| KRH11525 | Soybean | plastid | 47.89 | 56.98 |
| KRH36541 | Soybean | plastid | 48.83 | 55.03 |
| VIT_00s0187g00290.t01 | Wine grape | mitochondrion | 53.52 | 52.53 |
| PGSC0003DMT400060695 | Potato | cytosol | 49.77 | 50.48 |
| TraesCS6D01G263100.1 | Wheat | plastid | 30.52 | 33.68 |
| TraesCS6A01G282600.1 | Wheat | plastid | 30.05 | 32.65 |
| Zm00001d017861_P001 | Maize | cytosol | 30.05 | 32.49 |
| HORVU6Hr1G070830.1 | Barley | plastid | 28.17 | 32.09 |
| EES07356 | Sorghum | cytosol | 30.99 | 31.58 |
| Zm00001d051689_P001 | Maize | cytosol | 29.58 | 29.86 |
| Os02t0719700-01 | Rice | cytosol | 29.58 | 29.58 |
| GSMUA_Achr7P20350_001 | Banana | plastid | 32.86 | 28.57 |
Protein Annotations
| Gene3D:1.20.58.120 | MapMan:35.1 | InterPro:BAG_dom_sf | InterPro:BAG_domain | EnsemblPlantsGene:Bra016795 | EnsemblPlants:Bra016795.1 |
| EnsemblPlants:Bra016795.1-P | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0051087 | InterPro:IPR000048 |
| InterPro:IPR003103 | InterPro:IPR036533 | InterPro:IQ_motif_EF-hand-BS | UniProt:M4DJW7 | PFAM:PF02179 | PFscan:PS50096 |
| PFscan:PS51035 | PANTHER:PTHR33322 | PANTHER:PTHR33322:SF8 | SMART:SM00264 | SUPFAM:SSF63491 | UniParc:UPI000254621C |
| SEG:seg | : | : | : | : | : |
Description
AT1G12060 (E=1e-074) ATBAG5 | ATBAG5 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 5); protein binding
Coordinates
chrA08:-:20027833..20028474
Molecular Weight (calculated)
24385.9 Da
IEP (calculated)
8.464
GRAVY (calculated)
-0.731
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRSRKFSSS ATTTTVIHTF YNDHTAPPAT REIPIETPTP AAKATVMTNA SADKATAAAR IQSGYRSHKI RGLYKTISSV HREANRAQSM IQRQETVDAI
101: RSDEKERLRM NETLMSLLLK LDSVPGLDPT IREARRKVSR QIVGMQEILD AISEAKDENQ WWSNYGDGQG GAWPMYWEEA VEEEMCRERG GDEMERFCAQ
201: YLGFRCFQRF LRE
101: RSDEKERLRM NETLMSLLLK LDSVPGLDPT IREARRKVSR QIVGMQEILD AISEAKDENQ WWSNYGDGQG GAWPMYWEEA VEEEMCRERG GDEMERFCAQ
201: YLGFRCFQRF LRE
001: MKRSRKFSSS TTTTTVIHTF YNDHTTPPAT KEIPIETPLP ATKANVKTNA TAAAARIQSG YRSYRIRNLY KKISSINREA NRVQSIIQRQ ETVDAIRSDE
101: KERLRMNETL MALLLKLDSV PGLDPTIREA RRKVSRKIVG MQEILDSISE TKDEIQWWNY NDLGGVDSGQ GGGAWPLYWE EAVEEEMCRE RGGEEMERFC
201: AQYLGFRCFQ RFLRE
101: KERLRMNETL MALLLKLDSV PGLDPTIREA RRKVSRKIVG MQEILDSISE TKDEIQWWNY NDLGGVDSGQ GGGAWPLYWE EAVEEEMCRE RGGEEMERFC
201: AQYLGFRCFQ RFLRE
Arabidopsis Description
BAG5BAG5 [Source:UniProtKB/TrEMBL;Acc:A0A178WFD4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.