Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CDY40362 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G12060.1 | CDY40362 | AT5G02500.1 | 16003391 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016795.1-P | Field mustard | cytosol | 92.42 | 91.55 |
| CDY21029 | Canola | cytosol | 91.94 | 91.08 |
| AT1G12060.1 | Thale cress | cytosol | 80.57 | 79.07 |
| VIT_00s0187g00330.t01 | Wine grape | cytosol | 30.81 | 66.33 |
| Solyc04g014740.1.1 | Tomato | cytosol | 28.44 | 60.61 |
| KRH11525 | Soybean | plastid | 48.82 | 57.54 |
| KRH36541 | Soybean | plastid | 49.76 | 55.56 |
| VIT_00s0187g00290.t01 | Wine grape | mitochondrion | 54.5 | 53.0 |
| PGSC0003DMT400060695 | Potato | cytosol | 49.29 | 49.52 |
| Zm00001d017861_P001 | Maize | cytosol | 31.75 | 34.01 |
| TraesCS6D01G263100.1 | Wheat | plastid | 30.81 | 33.68 |
| EES07356 | Sorghum | cytosol | 32.7 | 33.01 |
| TraesCS6A01G282600.1 | Wheat | plastid | 30.33 | 32.65 |
| HORVU6Hr1G070830.1 | Barley | plastid | 28.44 | 32.09 |
| Zm00001d051689_P001 | Maize | cytosol | 30.33 | 30.33 |
| Os02t0719700-01 | Rice | cytosol | 30.33 | 30.05 |
| GSMUA_Achr7P20350_001 | Banana | plastid | 33.18 | 28.57 |
Protein Annotations
| Gene3D:1.20.58.120 | MapMan:35.1 | GO:A0A078H0F5 | UniProt:A0A078H0F5 | InterPro:BAG_dom_sf | InterPro:BAG_domain |
| EnsemblPlants:CDY31236 | ProteinID:CDY31236 | ProteinID:CDY31236.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0051087 | EnsemblPlantsGene:GSBRNA2T00047374001 | InterPro:IPR000048 | InterPro:IPR003103 | InterPro:IPR036533 | InterPro:IQ_motif_EF-hand-BS |
| PFAM:PF02179 | PFscan:PS50096 | PFscan:PS51035 | PANTHER:PTHR33322 | PANTHER:PTHR33322:SF8 | SMART:SM00264 |
| SUPFAM:SSF63491 | UniParc:UPI0004EAF8AD | SEG:seg | : | : | : |
Description
BnaC08g15310DBnaC08g15310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0F5]
Coordinates
chrLK032269:+:136162..137036
Molecular Weight (calculated)
24250.7 Da
IEP (calculated)
8.464
GRAVY (calculated)
-0.783
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRSRKFSSS STTTTVIHTF YNDHTAPQTT REIPIETPPP PAKATVTINA SGDKAAARIQ SGYRSHKIRG LYKTISSVHR EANRAQSMIQ RQETVDAIRS
101: DEKERLRMNE ALMSLLLKLD SVPGLDPTIR EARRKVSRQI VGMQEILDAI SEAKDENQWW SNYGDGQGGA WPMYWEEAVE EEMCRERGGD EMERFCAQYL
201: GFRCFQRFLR E
101: DEKERLRMNE ALMSLLLKLD SVPGLDPTIR EARRKVSRQI VGMQEILDAI SEAKDENQWW SNYGDGQGGA WPMYWEEAVE EEMCRERGGD EMERFCAQYL
201: GFRCFQRFLR E
001: MKRSRKFSSS TTTTTVIHTF YNDHTTPPAT KEIPIETPLP ATKANVKTNA TAAAARIQSG YRSYRIRNLY KKISSINREA NRVQSIIQRQ ETVDAIRSDE
101: KERLRMNETL MALLLKLDSV PGLDPTIREA RRKVSRKIVG MQEILDSISE TKDEIQWWNY NDLGGVDSGQ GGGAWPLYWE EAVEEEMCRE RGGEEMERFC
201: AQYLGFRCFQ RFLRE
101: KERLRMNETL MALLLKLDSV PGLDPTIREA RRKVSRKIVG MQEILDSISE TKDEIQWWNY NDLGGVDSGQ GGGAWPLYWE EAVEEEMCRE RGGEEMERFC
201: AQYLGFRCFQ RFLRE
Arabidopsis Description
BAG5BAG5 [Source:UniProtKB/TrEMBL;Acc:A0A178WFD4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.