Factsheet for VIT_00s0187g00290.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0187g00330.t01	Wine grape	cytosol	39.63	87.76
Solyc04g014740.1.1	Tomato	cytosol	33.18	72.73
KRH11525	Soybean	plastid	51.61	62.57
PGSC0003DMT400060695	Potato	cytosol	57.6	59.52
KRH36541	Soybean	plastid	49.31	56.61
CDY31236	Canola	cytosol	53.0	54.5
AT1G12060.1	Thale cress	cytosol	53.46	53.95
Bra016795.1-P	Field mustard	cytosol	52.53	53.52
CDY21029	Canola	cytosol	52.07	53.05
HORVU6Hr1G070830.1	Barley	plastid	30.41	35.29
TraesCS6D01G263100.1	Wheat	plastid	31.34	35.23
TraesCS6A01G282600.1	Wheat	plastid	31.34	34.69
EES07356	Sorghum	cytosol	33.18	34.45
Zm00001d017861_P001	Maize	cytosol	30.41	33.5
Zm00001d051689_P001	Maize	cytosol	29.95	30.81
GSMUA_Achr7P20350_001	Banana	plastid	34.56	30.61
Os02t0719700-01	Rice	cytosol	29.95	30.52
VIT_01s0146g00150.t01	Wine grape	plastid	28.57	13.16

Protein Annotations

Gene3D:1.20.58.120	EntrezGene:100853520	wikigene:100853520	MapMan:35.1	InterPro:BAG_dom_sf	InterPro:BAG_domain
ProteinID:CCB57333	ProteinID:CCB57333.1	UniProt:F6HRM5	EMBL:FN596025	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0006457	GO:GO:0008150	GO:GO:0009266	GO:GO:0009506
GO:GO:0009605	GO:GO:0009607	GO:GO:0009628	GO:GO:0009987	GO:GO:0043207	GO:GO:0051087
InterPro:IPR000048	InterPro:IPR003103	InterPro:IPR036533	InterPro:IQ_motif_EF-hand-BS	EntrezGene:LOC100853520	wikigene:LOC100853520
PFAM:PF02179	PFscan:PS50096	PFscan:PS51035	PANTHER:PTHR33322	PANTHER:PTHR33322:SF8	SMART:SM00264
SUPFAM:SSF63491	UniParc:UPI0002109681	ArrayExpress:VIT_00s0187g00290	EnsemblPlantsGene:VIT_00s0187g00290	EnsemblPlants:VIT_00s0187g00290.t01	RefSeq:XP_003635020
RefSeq:XP_003635020.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:9199845..9201310

Molecular Weight (calculated)

24647.2 Da

IEP (calculated)

6.253

GRAVY (calculated)

-0.507

Length

217 amino acids

Sequence
(BLAST)

001: MKPSRRFSFF SSSSSSSSST TTTTVIYTFR DDQTTPHPQF NEIPIHSSPE PPIPITVHLP QPSESAAAVA IQSAYRAHLI RTLVRKISAV SSEADHLQRL
101: IQRQETVDAI RSDDREKLKM NEALMALLLK LDSVPGLDPA VRDLRRSVSR RIVGMQEILD SVSDTRTDGW DGFLRNWDKA IDEMEEEVCK ERGGDEMERF
201: CAEHLGFRCL QRFLREA

Best Arabidopsis Sequence Match ( AT1G12060.1 )
(BLAST)

001: MKRSRKFSSS TTTTTVIHTF YNDHTTPPAT KEIPIETPLP ATKANVKTNA TAAAARIQSG YRSYRIRNLY KKISSINREA NRVQSIIQRQ ETVDAIRSDE
101: KERLRMNETL MALLLKLDSV PGLDPTIREA RRKVSRKIVG MQEILDSISE TKDEIQWWNY NDLGGVDSGQ GGGAWPLYWE EAVEEEMCRE RGGEEMERFC
201: AQYLGFRCFQ RFLRE

Arabidopsis Description

BAG5BAG5 [Source:UniProtKB/TrEMBL;Acc:A0A178WFD4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.