Factsheet for VIT_01s0146g00150.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g084170.1.1	Tomato	cytosol	16.77	46.47
PGSC0003DMT400027123	Potato	cytosol	16.35	45.03
KRH01566	Soybean	cytosol, plastid	22.51	34.98
Solyc06g072430.1.1	Tomato	plastid	26.75	33.78
PGSC0003DMT400091458	Potato	nucleus	25.69	32.88
VIT_00s0187g00330.t01	Wine grape	cytosol	6.16	29.59
KRH01570	Soybean	nucleus	23.57	29.44
KRH70544	Soybean	cytosol	21.02	29.29
VIT_00s0187g00290.t01	Wine grape	mitochondrion	13.16	28.57
GSMUA_Achr10P...	Banana	cytosol	18.26	16.63

Protein Annotations

Gene3D:1.20.58.120	EntrezGene:100260747	wikigene:100260747	MapMan:35.2	ProteinID:ACZ48681	ProteinID:ACZ48681.1
InterPro:BAG_dom_sf	InterPro:BAG_domain	ProteinID:CCB60848	ProteinID:CCB60848.1	ncoils:Coil	UniProt:F6I1N1
EMBL:FN596513	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006457
GO:GO:0008150	GO:GO:0009266	GO:GO:0009506	GO:GO:0009605	GO:GO:0009607	GO:GO:0009628
GO:GO:0009987	GO:GO:0043207	GO:GO:0051087	EMBL:GU169698	InterPro:IPR000048	InterPro:IPR003103
InterPro:IPR036533	InterPro:IQ_motif_EF-hand-BS	EntrezGene:LOC100260747	wikigene:LOC100260747	PFAM:PF00612	PFAM:PF02179
PFscan:PS50096	PFscan:PS51035	PANTHER:PTHR33322	PANTHER:PTHR33322:SF6	SMART:SM00015	SMART:SM00264
SUPFAM:SSF63491	TIGR:TC56005	UniParc:UPI000210A5A7	ArrayExpress:VIT_01s0146g00150	EnsemblPlantsGene:VIT_01s0146g00150	EnsemblPlants:VIT_01s0146g00150.t01
unigene:Vvi.7021	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1:-:21937512..21939274

Molecular Weight (calculated)

52224.1 Da

IEP (calculated)

4.452

GRAVY (calculated)

-0.625

Length

471 amino acids

Sequence
(BLAST)

001: MDSPVFGSQW NLPSRTRRYP ATRQVPVHRQ MPVPSPKVVS IPVHFVGSER TRSASAVKIQ KVFRGFLVRK NMKRIVAVKR EIDEVERRIS REEIVDMIRR
101: DSKERLKVNE TLMSLLLRLD SVRGVDSGVR DCRKAVIRRA IALQEKVDAI AASDQTVDSE THTETSDPSS ELIDGSRSEA VDGIQELSVD CDSAADETLE
201: IKDSICEYSA NGALETAPDP AVVSDDCNVD GALQLQNPVE HVIDSGDSKV MSESTLDCCV DSADESKEEM DVTEIGVDSE INANKDVSTP KETVEDPDDS
301: KALPRSSPDS CDDSVHEIKE DVDVAEVIDE IKEDMDVTEV GVDSEINANE EAYAPKEIVE DPSSNPRVNE CAGVEGNQEH GKEDQSNGEL LEKIMEENAK
401: LMCLMTKLFE KNEAQTRLLS SLSQRVEHLE RSIMCEKLRK KKRQAAAGQE ASPDAKKCGK KLLVFTSSRY E

Best Arabidopsis Sequence Match ( AT1G12060.1 )
(BLAST)

001: MKRSRKFSSS TTTTTVIHTF YNDHTTPPAT KEIPIETPLP ATKANVKTNA TAAAARIQSG YRSYRIRNLY KKISSINREA NRVQSIIQRQ ETVDAIRSDE
101: KERLRMNETL MALLLKLDSV PGLDPTIREA RRKVSRKIVG MQEILDSISE TKDEIQWWNY NDLGGVDSGQ GGGAWPLYWE EAVEEEMCRE RGGEEMERFC
201: AQYLGFRCFQ RFLRE

Arabidopsis Description

BAG5BAG5 [Source:UniProtKB/TrEMBL;Acc:A0A178WFD4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.