CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01570	Soybean	nucleus	68.65	55.17
KRH70544	Soybean	cytosol	55.78	50.0
Solyc10g084170.1.1	Tomato	cytosol	18.81	33.53
PGSC0003DMT400027123	Potato	cytosol	18.15	32.16
PGSC0003DMT400091458	Potato	nucleus	36.3	29.89
Solyc06g072430.1.1	Tomato	plastid	34.98	28.42
KRH11525	Soybean	plastid	14.19	24.02
KRH36541	Soybean	plastid	14.52	23.28
VIT_01s0146g00150.t01	Wine grape	plastid	34.98	22.51
GSMUA_Achr10P...	Banana	cytosol	22.44	13.15

Protein Annotations

Gene3D:1.20.58.120	MapMan:35.2	UniProt:A0A0R0F5K2	EMBL:ACUP02011521	InterPro:BAG_dom_sf	InterPro:BAG_domain
ncoils:Coil	EnsemblPlantsGene:GLYMA_18G284900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0051087
InterPro:IPR000048	InterPro:IPR003103	InterPro:IPR036533	InterPro:IQ_motif_EF-hand-BS	EnsemblPlants:KRH01566	ProteinID:KRH01566
ProteinID:KRH01566.1	PFAM:PF00612	PFAM:PF02179	PFscan:PS50096	PFscan:PS51035	PANTHER:PTHR33322
PANTHER:PTHR33322:SF6	SMART:SM00264	SUPFAM:SSF63491	UniParc:UPI0006ED83D9	SEG:seg	:

Description

hypothetical protein

Coordinates

chr18:-:56556144..56557078

Molecular Weight (calculated)

35051.0 Da

IEP (calculated)

4.908

GRAVY (calculated)

-0.827

Length

303 amino acids

Sequence
(BLAST)

001: MADPCYRKAP SKVVSIPVHF VGSERTRTNS DSATKIQRVL RGFLVRNTLR KIAAMRVELE RIECEVRVEV MKLKREQRER VRVSETIMNL LLKLDSVRVL
101: HYSGLRECRK SLINKAIALQ EMLDQMAVPN SDECVGEENY LVNEEERNGE VEKEKDMCME EENIGLGTSF VVEKEGEIKC EEQEEGEEIE ALNNEDVEEE
201: DSEGGRGFVG ENCLVKEEEG DCEREKGDGK KDLLEKMVED NQKMMEMMAQ LFQRNEMQTT LLTSLTQRVE QLERALACER LRRKKNRKDG SKKKQNHPKN
301: GFI

Best Arabidopsis Sequence Match ( AT1G12060.1 )
(BLAST)

001: MKRSRKFSSS TTTTTVIHTF YNDHTTPPAT KEIPIETPLP ATKANVKTNA TAAAARIQSG YRSYRIRNLY KKISSINREA NRVQSIIQRQ ETVDAIRSDE
101: KERLRMNETL MALLLKLDSV PGLDPTIREA RRKVSRKIVG MQEILDSISE TKDEIQWWNY NDLGGVDSGQ GGGAWPLYWE EAVEEEMCRE RGGEEMERFC
201: AQYLGFRCFQ RFLRE

Arabidopsis Description

BAG5BAG5 [Source:UniProtKB/TrEMBL;Acc:A0A178WFD4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.