Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- cytosol 2
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS6D01G402500.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G12060.1 | TraesCS6D01G402500.1 | AT5G02500.1 | 16003391 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G282600.1 | Wheat | plastid | 94.82 | 93.37 |
| HORVU6Hr1G070830.1 | Barley | plastid | 88.6 | 91.44 |
| EES07356 | Sorghum | cytosol | 72.54 | 66.99 |
| Zm00001d017861_P001 | Maize | cytosol | 67.88 | 66.5 |
| Os02t0719700-01 | Rice | cytosol | 70.98 | 64.32 |
| Zm00001d051689_P001 | Maize | cytosol | 68.91 | 63.03 |
| KRH11525 | Soybean | plastid | 34.72 | 37.43 |
| Solyc04g014740.1.1 | Tomato | cytosol | 18.65 | 36.36 |
| VIT_00s0187g00330.t01 | Wine grape | cytosol | 18.13 | 35.71 |
| KRH36541 | Soybean | plastid | 33.68 | 34.39 |
| PGSC0003DMT400060695 | Potato | cytosol | 36.27 | 33.33 |
| GSMUA_Achr7P20350_001 | Banana | plastid | 41.45 | 32.65 |
| AT1G12060.1 | Thale cress | cytosol | 35.23 | 31.63 |
| VIT_00s0187g00290.t01 | Wine grape | mitochondrion | 35.23 | 31.34 |
| CDY31236 | Canola | cytosol | 33.68 | 30.81 |
| Bra016795.1-P | Field mustard | cytosol | 33.68 | 30.52 |
| CDY21029 | Canola | cytosol | 33.16 | 30.05 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G263100.1 | EnsemblPlantsGene:TraesCS6D01G263100 | Gene3D:1.20.58.120 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0051087 | InterPro:BAG_dom_sf | InterPro:BAG_domain | InterPro:IPR000048 | InterPro:IPR003103 | InterPro:IPR036533 |
| InterPro:IQ_motif_EF-hand-BS | ncoils:Coil | PANTHER:PTHR33322 | PANTHER:PTHR33322:SF6 | PFAM:PF02179 | PFscan:PS50096 |
| PFscan:PS51035 | SEG:seg | SMART:SM00264 | SUPFAM:SSF63491 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6D:+:372041019..372041600
Molecular Weight (calculated)
20868.8 Da
IEP (calculated)
11.243
GRAVY (calculated)
-0.217
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSYRYSSAS QFFFAAGEAG PGPAARKPAR TVRIPVTTPQ DAAAARIQAA FRSRRVRRHV AAVRSADAEA TRLERLLRRQ ETVDAVRGDD RERARFSEAL
101: MAVLLRLDAV PGHDPAVREA RRAVSRRVVG LQEVFDSVLA APEADTYGVP ASLAQVLEGI WGIGEAPVAP PPPAVAAEEE ARRSGWGRFF AVL
101: MAVLLRLDAV PGHDPAVREA RRAVSRRVVG LQEVFDSVLA APEADTYGVP ASLAQVLEGI WGIGEAPVAP PPPAVAAEEE ARRSGWGRFF AVL
001: MKRSRKFSSS TTTTTVIHTF YNDHTTPPAT KEIPIETPLP ATKANVKTNA TAAAARIQSG YRSYRIRNLY KKISSINREA NRVQSIIQRQ ETVDAIRSDE
101: KERLRMNETL MALLLKLDSV PGLDPTIREA RRKVSRKIVG MQEILDSISE TKDEIQWWNY NDLGGVDSGQ GGGAWPLYWE EAVEEEMCRE RGGEEMERFC
201: AQYLGFRCFQ RFLRE
101: KERLRMNETL MALLLKLDSV PGLDPTIREA RRKVSRKIVG MQEILDSISE TKDEIQWWNY NDLGGVDSGQ GGGAWPLYWE EAVEEEMCRE RGGEEMERFC
201: AQYLGFRCFQ RFLRE
Arabidopsis Description
BAG5BAG5 [Source:UniProtKB/TrEMBL;Acc:A0A178WFD4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.