Factsheet for GSMUA_Achr10P03520_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, unclear, cytosol

Predictor Summary:

nucleus 1
cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, unclear
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

unclear: 20177697
plasma membrane: 21334471

msms PMID: 21334471 doi

A Vertommen, AL Møller, JH Cordewener, R Swennen, B Panis, C Finnie, AH America, SC Carpentier

Laboratory of Tropical Crop Improvement, Department of Biosystems, K.U. Leuven, Kasteelpark Arenberg 13, PO box 2455, B-3001 Heverlee, Belgium.

msms PMID: 20177697 doi

A Vertommen, B Panis, R Swennen, SC Carpentier

Division of Crop Biotechnics, Department of Biosystems, K U Leuven, Leuven, Belgium. Annelies.vertommen@biw.kuleuven.be

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56010.1	GSMUA_AchrUn_...	AT5G66570.1	16619024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	86.72	93.93
GSMUA_Achr9P12680_001	Banana	cytosol	79.68	89.25
GSMUA_Achr3P10970_001	Banana	cytosol, plasma membrane	83.68	88.64
GSMUA_Achr3P04010_001	Banana	cytosol	79.2	87.92
EES14299	Sorghum	cytosol	93.92	84.1
Zm00001d031332_P007	Maize	cytosol	90.72	84.0
Zm00001d006008_P001	Maize	plastid	93.44	83.67
Zm00001d052855_P001	Maize	plasma membrane	93.44	83.55
EER96954	Sorghum	cytosol	93.44	83.55
Os09t0482100-01	Rice	nucleus	93.44	83.55
Os09t0482400-01	Rice	nucleus	93.44	83.55
Os09t0482600-01	Rice	cytosol	93.44	83.55
EER99075	Sorghum	cytosol	93.28	83.4
TraesCS5D01G268000.1	Wheat	cytosol	92.8	82.86
TraesCS5B01G258900.2	Wheat	golgi	92.8	82.86
TraesCS5A01G260600.3	Wheat	nucleus	92.64	82.71
TraesCS7D01G241100.1	Wheat	golgi	92.64	82.71
TraesCS7A01G242200.1	Wheat	cytosol, plastid, unclear	92.32	82.43
TraesCS7B01G149200.1	Wheat	golgi	92.16	82.29
Solyc12g015880.1.1	Tomato	nucleus	92.0	82.26
Solyc07g065840.2.1	Tomato	nucleus, plastid	91.52	81.83
Bra035593.1-P	Field mustard	cytosol	87.04	80.95
Bra028952.1-P	Field mustard	cytosol	90.24	80.69
Bra028924.1-P	Field mustard	cytosol	90.24	80.69
Bra035599.1-P	Field mustard	cytosol	72.64	80.64
Bra028948.1-P	Field mustard	cytosol	89.92	80.52
Os08t0500700-01	Rice	extracellular, plasma membrane, vacuole	89.12	80.26
AT5G56010.1	Thale cress	cytosol	89.76	80.26
CDY11961	Canola	cytosol	46.56	79.95
GSMUA_Achr8P19130_001	Banana	cytosol	74.08	79.55
AT5G56000.1	Thale cress	cytosol	88.64	79.26
HORVU5Hr1G072420.2	Barley	plasma membrane	92.48	79.18
CDY22598	Canola	cytosol	59.04	77.68
CDY11967	Canola	cytosol	71.52	77.6
Zm00001d020898_P002	Maize	cytosol	88.0	77.57
AT5G56030.2	Thale cress	cytosol	90.24	77.47
GSMUA_Achr3P04050_001	Banana	cytosol	15.52	75.78
KRH33083	Soybean	cytosol	33.92	75.44
CDY11962	Canola	cytosol	17.12	73.79
CDY64982	Canola	cytosol	64.8	73.77
CDY06551	Canola	cytosol	67.52	73.65
CDY20742	Canola	cytosol	64.8	73.5
CDY36775	Canola	cytosol	17.28	73.47
CDY36807	Canola	cytosol	67.36	73.22
CDY36776	Canola	cytosol	42.4	73.0
CDY36772	Canola	cytosol	42.4	73.0
CDY36771	Canola	cytosol	17.12	72.79
KRH05319	Soybean	endoplasmic reticulum	37.6	72.76
CDY11921	Canola	cytosol	62.08	72.25
HORVU7Hr1G049370.2	Barley	cytosol, mitochondrion, plastid	73.92	70.64
PGSC0003DMT400014812	Potato	cytosol	21.44	55.83
KRH50203	Soybean	cytosol	23.04	47.37
GSMUA_Achr1P07620_001	Banana	endoplasmic reticulum	50.56	38.77
GSMUA_Achr7P17770_001	Banana	endoplasmic reticulum	50.4	38.7
GSMUA_Achr9P22700_001	Banana	plastid	45.92	36.06
TraesCS5D01G258900.2	Wheat	plastid	44.64	35.72
GSMUA_Achr3P28100_001	Banana	plastid	45.6	35.71
VIT_05s0062g00690.t01	Wine grape	cytosol	13.44	34.71
GSMUA_Achr10P...	Banana	mitochondrion	43.2	34.18
Os09t0534600-01	Rice	endoplasmic reticulum, golgi, plasma membrane	11.36	16.47
TraesCS5D01G258800.1	Wheat	cytosol	0.48	1.2

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.40.50.11260	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr10G03520_001	EnsemblPlants:GSMUA_Achr10P03520_001
EnsemblPlants:GSMUA_Achr10T03520_001	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N
InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196	UniProt:M0RF29	HAMAP:MF_00505	PFAM:PF00183
PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF74
InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	UniParc:UPI0002951305
SEG:seg	:	:	:	:	:

Description

Heat shock protein 81-2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G03520_001]

Coordinates

chr10:-:11527026..11530423

Molecular Weight (calculated)

71517.8 Da

IEP (calculated)

4.621

GRAVY (calculated)

-0.553

Length

625 amino acids

Sequence
(BLAST)

001: MATETETFAF QAEINQLLSL IINTFYSNKE IFLRELISNS SDALDKIRFE SLTDKSKLDA QPELFIHIVP DKATNTLSII DSGIGMTKSD LVNNLGTIAR
101: SGTKEFMEAL AAGADVSMIG QFGVGFYSAY LVAERVVVTT KHNDDEQYVW ESQAGGSFTV TRDTSGESLG RGTKITLFLK EDQLEYLEER RLKDLIKKHS
201: EFISYPISLW TEKTTEKEIS DDEDEEDKKD TEEGKEEYAA FYKSLTNDWE EHLAVKHFSV EGQLEFKAVL FVPKRAPFDL FDTRKKLNNI KLYVRRVFIM
301: DNCEEIIPEY LSFVKGIVDS EDLPLNISRE TLQQNKILKV IRKNLVKKCM ELFFEIAENK DDYNKFYEAF SKNLKLGIHE DSQNRSKLAE LLRFHSTRSG
401: DEMTSLKDYV TRMKEGQSDI YYITGESKKA VENSPFLEKL KKKGYEVLFM VDAIDEYAVG QLKEFEGKKL LSATKEGLKL DESEDEKKRT EVLKEKFEGL
501: CKVIKEVLGD KVEKAQALRD SSMAGYMSSK KTMEINPENP IMEELRKRAD ADKNDKSVKD LTLLLFETAL LTSGFSLDDP NTFGNRIHRM LKLGLSIDED
601: EKAEDTDMPP LEEADAEESK MEEVD

Best Arabidopsis Sequence Match ( AT5G56030.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIHIIPD KTNNTLTIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALA AGADVSMIGQ FGVGFYSAYL VADKVVVTTK HNDDEQYVWE SQAGGSFTVT RDTSGETLGR GTKMVLYLKE DQLEYLEERR LKDLVKKHSE
201: FISYPISLWI EKTIEKEISD DEEEEEKKDE EGKVEEVDEE KEKEEKKKKK IKEVSHEWDL VNKQKPIWMR KPEEINKEEY AAFYKSLSND WEEHLAVKHF
301: SVEGQLEFKA ILFVPKRAPF DLFDTKKKPN NIKLYVRRVF IMDNCEDIIP EYLGFVKGIV DSEDLPLNIS RETLQQNKIL KVIRKNLVKK CLELFFEIAE
401: NKEDYNKFYE AFSKNLKLGI HEDSQNRTKI AELLRYHSTK SGDELTSLKD YVTRMKEGQN DIFYITGESK KAVENSPFLE KLKKKGIEVL YMVDAIDEYA
501: IGQLKEFEGK KLVSATKEGL KLDETEDEKK KKEELKEKFE GLCKVIKDVL GDKVEKVIVS DRVVDSPCCL VTGEYGWTAN MERIMKAQAL RDSSMAGYMS
601: SKKTMEINPE NSIMDELRKR ADADKNDKSV KDLVLLLFET ALLTSGFSLD EPNTFGSRIH RMLKLGLSID DDDAVEADAE MPPLEDDADA EGSKMEEVD

Arabidopsis Description

HSP81-2Heat shock protein 81-2 [Source:UniProtKB/TrEMBL;Acc:F4K6B6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.