CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94627	Soybean	cytosol	62.54	64.95
KRH33083	Soybean	cytosol	56.35	64.77
KRH04730	Soybean	cytosol	62.54	56.11
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, unclear	72.76	37.6
KRH14196	Soybean	endoplasmic reticulum, nucleus	79.57	36.71
KRH73936	Soybean	endoplasmic reticulum, nucleus	78.95	36.32
KRH41482	Soybean	mitochondrion	72.14	35.57
KRH46427	Soybean	nucleus	76.78	35.48
KRG98439	Soybean	nucleus	76.16	35.04
Zm00001d006008_P001	Maize	plastid	75.23	34.81
EER99075	Sorghum	cytosol	75.23	34.76
EER96954	Sorghum	cytosol	75.23	34.76
Os09t0482600-01	Rice	cytosol	74.92	34.62
Os09t0482400-01	Rice	nucleus	74.92	34.62
Os09t0482100-01	Rice	nucleus	74.92	34.62
KRH38373	Soybean	nucleus	73.37	33.91
KRH08858	Soybean	nucleus	73.06	33.76
GSMUA_Achr11P...	Banana	cytosol	57.89	32.41
GSMUA_Achr3P10970_001	Banana	cytosol, plasma membrane	59.13	32.37
GSMUA_Achr3P04010_001	Banana	cytosol	47.37	27.18
GSMUA_Achr9P12680_001	Banana	cytosol	46.75	27.06
PGSC0003DMT400014812	Potato	cytosol	17.65	23.75
VIT_05s0062g00690.t01	Wine grape	cytosol	14.24	19.01
KRH05964	Soybean	endoplasmic reticulum	44.27	17.57
KRH17444	Soybean	nucleus	44.27	16.88
TraesCS5D01G258900.2	Wheat	plastid	40.56	16.77
KRH71021	Soybean	nucleus	39.63	16.12
KRH14117	Soybean	mitochondrion	39.63	16.06
KRH75182	Soybean	plastid	39.01	15.89
KRH74006	Soybean	mitochondrion	38.7	15.8
KRH50203	Soybean	cytosol	12.69	13.49
Os09t0534600-01	Rice	endoplasmic reticulum, golgi, plasma membrane	4.33	3.25
KRG89657	Soybean	cytosol	0.62	1.8
TraesCS5D01G258800.1	Wheat	cytosol	0.0	0.0

Protein Annotations

MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.40.50.11260	UniProt:A0A0R0FGQ5	EMBL:ACUP02010726	EnsemblPlantsGene:GLYMA_17G220000
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0051082	InterPro:Hsp90_fam	EnsemblPlants:KRH05319	ProteinID:KRH05319	ProteinID:KRH05319.1	PFAM:PF00183
PANTHER:PTHR11528	PANTHER:PTHR11528:SF71	InterPro:Ribosomal_S5_D2-typ_fold	SUPFAM:SSF54211	UniParc:UPI0006EDAB4C	SEG:seg

Description

hypothetical protein

Coordinates

chr17:+:37190427..37192189

Molecular Weight (calculated)

37709.9 Da

IEP (calculated)

6.441

GRAVY (calculated)

-0.627

Length

323 amino acids

Sequence
(BLAST)

001: MAPYSSKHHH TSPGHCDWNS AFHGQNGGMV YENIYYYFCN VLFNYSEEIT KEEYAAFYNS LTNDWEEHLA VKHFSVEGQL EFKAVLFIPK RACFDLFDTR
101: KKPNNIKLYV CHVFIMDNCE ELMPEYHSFV KGIVDSEDLP LNISREMLQQ NKILKVISKN LVKKCIDMFF EIAENKEDYN KLYEAFSNNL KLGIDEDSQN
201: KTKLAELLRY HSTKSGDDMT SLKDYVTRMK EGQNDIYYIT GESKKAVENS PFLEKLKKKG YEVLYMVDAI DDYAVGQLKE FAGKKLVSAS KEGLKLDESE
301: DKKKKKEDWL LKFYHTLTEG KKC

Best Arabidopsis Sequence Match ( AT5G52640.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIRLVPD KSNKTLSIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALQ AGADVSMIGQ FGVGFYSAYL VAEKVVVTTK HNDDEQYVWE SQAGGSFTVT RDVDGEPLGR GTKITLFLKD DQLEYLEERR LKDLVKKHSE
201: FISYPIYLWT EKTTEKEISD DEDEDEPKKE NEGEVEEVDE EKEKDGKKKK KIKEVSHEWE LINKQKPIWL RKPEEITKEE YAAFYKSLTN DWEDHLAVKH
301: FSVEGQLEFK AILFVPKRAP FDLFDTRKKL NNIKLYVRRV FIMDNCEELI PEYLSFVKGV VDSDDLPLNI SRETLQQNKI LKVIRKNLVK KCIEMFNEIA
401: ENKEDYTKFY EAFSKNLKLG IHEDSQNRGK IADLLRYHST KSGDEMTSFK DYVTRMKEGQ KDIFYITGES KKAVENSPFL ERLKKRGYEV LYMVDAIDEY
501: AVGQLKEYDG KKLVSATKEG LKLEDETEEE KKKREEKKKS FENLCKTIKE ILGDKVEKVV VSDRIVDSPC CLVTGEYGWT ANMERIMKAQ ALRDSSMSGY
601: MSSKKTMEIN PDNGIMEELR KRAEADKNDK SVKDLVMLLY ETALLTSGFS LDEPNTFAAR IHRMLKLGLS IDEDENVEED GDMPELEEDA AEESKMEEVD

Arabidopsis Description

HSP90-1Heat shock protein 90-1 [Source:UniProtKB/Swiss-Prot;Acc:P27323]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.