Factsheet for Os09t0482400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

nucleus: 18203134
extracellular: 21255809
plastid: 27992503
plasma membrane: 28056797

msms PMID: 18203134 doi

G Li, BR Nallamilli, F Tan, Z Peng

Department of Biochemistry and Molecular Biology, Mississippi State University, Mississippi State, MS 39762, USA.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 21255809 doi

T Shinano, S Komatsu, T Yoshimura, S Tokutake, FJ Kong, T Watanabe, J Wasaki, M Osaki

National Agriculture and Food Research Organization, National Agricultural Research Center for Hokkaido Region, 1-Hitsujigaoka, Toyohira-ku, Sapporo 062-8555, Japan. shinano@affrc.go.jp

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0501800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56010.1	Os01t0501800-01	AT5G66570.1	16619024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0482600-01	Rice	cytosol	100.0	100.0
Os09t0482100-01	Rice	nucleus	99.86	99.86
EER96954	Sorghum	cytosol	96.71	96.71
EER99075	Sorghum	cytosol	96.42	96.42
Zm00001d006008_P001	Maize	plastid	95.99	96.13
GSMUA_Achr9P12680_001	Banana	cytosol	75.39	94.44
GSMUA_Achr3P04010_001	Banana	cytosol	75.68	93.96
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, unclear	83.55	93.44
Os08t0500700-01	Rice	extracellular, plasma membrane, vacuole	92.27	92.94
GSMUA_Achr3P10970_001	Banana	cytosol, plasma membrane	77.97	92.37
GSMUA_Achr11P...	Banana	cytosol	76.11	92.2
Solyc12g015880.1.1	Tomato	nucleus	91.85	91.85
Solyc07g065840.2.1	Tomato	nucleus, plastid	91.42	91.42
Bra035593.1-P	Field mustard	cytosol	87.7	91.22
Bra028924.1-P	Field mustard	cytosol	90.84	90.84
Bra035599.1-P	Field mustard	cytosol	73.1	90.76
AT5G56010.1	Thale cress	cytosol	90.56	90.56
Bra028952.1-P	Field mustard	cytosol	90.41	90.41
Bra028948.1-P	Field mustard	cytosol	89.99	90.11
CDY22598	Canola	cytosol	61.09	89.89
CDY11961	Canola	cytosol	46.78	89.84
AT5G56000.1	Thale cress	cytosol	89.41	89.41
CDY11967	Canola	cytosol	73.68	89.41
AT5G56030.2	Thale cress	cytosol	90.84	87.23
KRH33083	Soybean	cytosol	34.76	86.48
CDY20742	Canola	cytosol	67.67	85.84
CDY36807	Canola	cytosol	70.53	85.74
CDY36771	Canola	cytosol	18.03	85.71
CDY64982	Canola	cytosol	67.24	85.61
CDY06551	Canola	cytosol	70.1	85.51
Os04t0107900-02	Rice	cytosol	30.33	85.14
CDY36775	Canola	cytosol	17.88	85.03
CDY11921	Canola	cytosol	65.24	84.92
CDY11962	Canola	cytosol	17.31	83.45
CDY36776	Canola	cytosol	43.06	82.92
CDY36772	Canola	cytosol	43.06	82.92
KRH05319	Soybean	endoplasmic reticulum	34.62	74.92
PGSC0003DMT400014812	Potato	cytosol	23.03	67.08
Os06t0716700-02	Rice	plasma membrane	50.36	43.35
VIT_05s0062g00690.t01	Wine grape	cytosol	14.88	42.98
Os09t0474300-01	Rice	plastid	35.34	37.77
Os12t0514500-01	Rice	mitochondrion	41.77	36.0
Os09t0534600-01	Rice	endoplasmic reticulum, golgi, plasma membrane	14.88	24.13

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
EntrezGene:4347405	PDB:4X9L	EntrezGene:9267802	EMBL:AK061896	EMBL:AK243060	ProteinID:BAD33409.1
ProteinID:BAF25417.1	ProteinID:BAH94622.1	ProteinID:BAT08654.1	ProteinID:BAT08658.1	ncoils:Coil	EMBL:D11138
EMBL:EU846990	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457	GO:GO:0006950
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HSP90_C
InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196	HAMAP:MF_00505
EnsemblPlantsGene:Os09g0482400	EnsemblPlants:Os09t0482400-01	PFAM:PF00183	PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775
ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF74	UniProt:Q07078	UniProt:Q0J0U8	InterPro:Ribosomal_S5_D2-typ_fold
EMBL:S56878	SMART:SM00387	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	UniParc:UPI00003FF38D
RefSeq:XP_015611111.1	RefSeq:XP_015611112.1	RefSeq:XP_015611113.1	SEG:seg	:	:

Description

80.2 KDA CLASS I HEAT SHOCK PROTEINSimilar to Heat shock protein 81-3. (Os09t0482400-01);Similar to Heat shock protein 81-3. (Os09t0482400-03)

Coordinates

chr9:-:18525590..18529774

Molecular Weight (calculated)

80188.2 Da

IEP (calculated)

4.691

GRAVY (calculated)

-0.599

Length

699 amino acids

Sequence
(BLAST)

001: MASETETFAF QAEINQLLSL IINTFYSNKE IFLRELISNS SDALDKIRFE SLTDKSKLDA QPELFIHIVP DKASNTLSII DSGVGMTKSD LVNNLGTIAR
101: SGTKEFMEAL AAGADVSMIG QFGVGFYSAY LVAERVVVTT KHNDDEQYVW ESQAGGSFTV TRDTSGEQLG RGTKITLYLK DDQLEYLEER RLKDLVKKHS
201: EFISYPISLW TEKTTEKEIS DDEDEEEKKD AEEGKVEDVD EEKEEKEKKK KKIKEVSHEW NVMNKQKPIW LRKPEEITKE EYAAFYKSLT NDWEEHLAVK
301: HFSVEGQLEF KAILFVPKRA PFDLFDTRKK QNNIKLYVRR VFIMDNCEEL IPEWLSFVKG IVDSEDLPLN ISREMLQQNK ILKVIRKNLV KKCVELFFEI
401: AENKEDYNKF YEAFSKNLKL GIHEDSTNRT KIAELLRYHS TKSGDELTSL KDYVTRMKEG QSEIYYITGE SKKAVENSPF LEKLKKKGYE VLYMVDAIDE
501: YAVGQLKEFE GKKLVSATKE GLKLDESEDE KKRQEELKEK FEGLCKVIKE VLGDKVEKVV VSDRVVDSPC CLVTGEYGWT ANMERIMKAQ ALRDSSMAGY
601: MSSKKTMEIN PENAIMDELR KRADADKNDK SVKDLVMLLF ETALLTSGFS LEDPNTFGTR IHRMLKLGLS IDEDESAEAD ADMPPLEDDA GESKMEEVD

Best Arabidopsis Sequence Match ( AT5G56000.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIHIIPD KTNNTLTIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALA AGADVSMIGQ FGVGFYSAYL VADKVVVTTK HNDDEQYVWE SQAGGSFTVT RDTSGEALGR GTKMILYLKE DQMEYIEERR LKDLVKKHSE
201: FISYPISLWI EKTIEKEISD DEEEEEKKDE EGKVEEIDEE KEKEEKKKKK IKEVTHEWDL VNKQKPIWMR KPEEINKEEY AAFYKSLSND WEEHLAVKHF
301: SVEGQLEFKA ILFVPKRAPF DLFDTKKKPN NIKLYVRRVF IMDNCEDIIP DYLGFVKGIV DSEDLPLNIS RETLQQNKIL KVIRKNLVKK CLELFFEIAE
401: NKEDYNKFYE AFSKNLKLGI HEDSQNRTKI AELLRYHSTK SGDELTSLKD YVTRMKEGQN EIFYITGESK KAVENSPFLE KLKKKGYEVL YMVDAIDEYA
501: IGQLKEFEGK KLVSATKEGL KLEETDDEKK KKEELKEKFE GLCKVIKDVL GDKVEKVIVS DRVVDSPCCL VTGEYGWTAN MERIMKAQAL KDSNTGGYMS
601: SKKTMEINPE NSIMDELRKR AEADKNDKSV KDLVLLLFET ALLTSGFSLD EPNTFGSRIH RMLKLGLSIE EDDAVEADAE MPPLEDDADA EGSKMEEVD

Arabidopsis Description

HSP90-4Hsp81.4 [Source:UniProtKB/TrEMBL;Acc:A0A178UQ52]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.