Factsheet for TraesCS5B01G106300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G101900.2	Wheat	mitochondrion	97.81	98.65
HORVU5Hr1G027910.13	Barley	plastid	95.26	90.32
Os12t0514500-01	Rice	mitochondrion	85.66	86.93
KXG23570	Sorghum	mitochondrion, plastid	82.62	84.26
TraesCS5D01G113700.1	Wheat	mitochondrion, plastid	97.81	84.12
Zm00001d041719_P001	Maize	mitochondrion	81.65	82.66
Zm00001d035285_P003	Maize	extracellular	80.19	82.09
GSMUA_Achr10P...	Banana	mitochondrion	71.08	74.05
KRH74006	Soybean	mitochondrion	69.62	72.44
PGSC0003DMT400015734	Potato	mitochondrion	69.62	72.17
Solyc07g047790.2.1	Tomato	mitochondrion, nucleus, plastid	69.5	72.04
KRH14117	Soybean	mitochondrion	69.5	71.77
VIT_12s0057g00670.t01	Wine grape	cytosol	72.42	70.37
AT3G07770.3	Thale cress	mitochondrion	67.31	69.34
Bra040027.1-P	Field mustard	mitochondrion	67.44	69.03
CDY22132	Canola	mitochondrion	67.31	68.91
CDY35962	Canola	mitochondrion	66.71	68.37
Bra029677.1-P	Field mustard	mitochondrion	59.66	67.63
CDY28017	Canola	mitochondrion	64.4	67.34
TraesCS5B01G249000.2	Wheat	plastid	58.57	61.72
TraesCS7B01G149200.1	Wheat	golgi	36.21	42.57
TraesCS5B01G258900.2	Wheat	golgi	36.09	42.43
TraesCS2B01G047400.1	Wheat	cytosol	36.21	41.85
TraesCS3B01G595900.1	Wheat	plastid	5.59	16.73

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196
HAMAP:MF_00505	PFAM:PF00183	PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298
PANTHER:PTHR11528	PANTHER:PTHR11528:SF41	InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387	SUPFAM:SSF110942	SUPFAM:SSF54211
SUPFAM:SSF55874	EnsemblPlantsGene:TraesCS5B01G106300	EnsemblPlants:TraesCS5B01G106300.1	TIGR:cd00075	SEG:seg	:

Description

No Description!

Coordinates

chr5B:+:143714281..143720598

Molecular Weight (calculated)

92503.4 Da

IEP (calculated)

4.944

GRAVY (calculated)

-0.516

Length

823 amino acids

Sequence
(BLAST)

001: MLGASRRSLC AGAAARRHAA AFAVSGDAAA AAASPSPSLS PSAPPRSVRM CDIDCMVTNP DPGVSRLGGK RLLSVLAAPK LNGVESLSSL KLRESALVGR
101: RYESSAAAVD SSDAPPAEKF EYQAEVNRLM DLIVHSLYSN KEVFLRELVS NASDALDKLR YLSVTDPDLL KDGPELDIRI QTDKDNGIIT ITDSGIGMTR
201: QELVDSLGTI ASSGTAKFLK TLKESQEANV DSNLIGQFGV GFYSAFLVSD KVAVSTKSPK SEKQYVWEAE AESNSYTIRE EKDPEKLIPR GTRLTLYLKR
301: DDKGFAHPER IQKLLKNYSQ FVSFPIYTWQ EKGFTKEVEV DEDPAEVKTG GDGEPKKEVK KKTKTVVEKY WDWELTNETQ PIWLRTPKEV STEEYNEFYK
401: KTFNEYLDPL ASSHFTTEGE VEFRSILYVP ATKKEDITDR KTKNIRLYVK RVFISDDFDG ELFPRYLSFV KGVVDSNDLP LNVSREILQE SRIVRIMRKR
501: LVRKAFDMIL GISCSENRDD YEAFWENYGK FLKLGCMEDK ENHKRIAPLL RFFSSQSNEE LISLDEYVES MKPEQKAIYY IAGDSLSSAK NAPFLEKLNE
601: MGYEVLLLID PMDEVSLTNL NSYKDKSFVD ISKEDLDLGD KNEEREKEMK QEYSQTCDWI KKRLGERVAR VDVSNRLSSS PCVLVAAKFG WSANMERLMR
701: AQSIGDTSSL DFMRSRKVFE INPEHEIIKR LNAACRINPD DPEALKAIDI LFETSMISSG FTPDNPTDLS GKIYDMMSTA MAGKWASQPQ PAQPSQQPAS
801: PSSSEPEPLE AEVVEPVEAG QQK

Best Arabidopsis Sequence Match ( AT3G07770.2 )
(BLAST)

001: MIRLSKRSVS TLLRSGNQSF RIAAAASTSR SSPSATDVKR SDTESRWYSS LTNGQSKNSG SFAQLNMKTN WFMGYRNESS AAASDSSSQA PPPAEKFEYQ
101: AEVSRLMDLI VNSLYSNKEV FLRELISNAS DALDKLRYLS VTNPELSKDA PDLDIRIYAD KENGIITLTD SGIGMTRQEL VDCLGTIAQS GTAKFMKALK
201: DSKDAGGDNN LIGQFGVGFY SAFLVADRVI VSTKSPKSDK QYVWEGEANS SSFTIQEDTD PQSLIPRGTR ITLHLKQEAK NFADPERIQK LVKNYSQFVS
301: FPIYTWQEKG YTKEVEVEDD PTETKKDDQD DQTEKKKKTK KVVERYWDWE LTNETQPIWL RNPKEVTTAE YNEFYRKAFN EYLDPLASSH FTTEGEVEFR
401: SILYVPPVSP SGKDDIVNQK TKNIRLYVKR VFISDDFDGE LFPRYLSFVK GVVDSHDLPL NVSREILQES RIVRIMKKRL VRKAFDMILG ISLSENREDY
501: EKFWDNFGKH LKLGCIEDRE NHKRIAPLLR FFSSQSENDM ISLDEYVENM KPEQKAIYFI ASDSITSAKN APFLEKMLEK GLEVLYLVEP IDEVAVQSLK
601: AYKEKDFVDI SKEDLDLGDK NEEKEAAVKK EFGQTCDWIK KRLGDKVASV QISNRLSSSP CVLVSGKFGW SANMERLMKA QSTGDTISLD YMKGRRVFEI
701: NPDHSIIKNI NAAYNSNPND EDAMRAIDLM YDAALVSSGF TPDNPAELGG KIYEMMDVAL SGKWSSPEVQ PQQQQMAHSH DAETFEAEVV EPVEVDGKK

Arabidopsis Description

HSP90-6Heat shock protein 90-6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JFN3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.