Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036596.1-P | Field mustard | mitochondrion | 96.22 | 82.89 |
| CDX87030 | Canola | mitochondrion, plastid | 96.55 | 81.78 |
| CDX80596 | Canola | extracellular | 93.43 | 79.69 |
| CDX88245 | Canola | mitochondrion | 93.27 | 79.11 |
| AT5G26830.1 | Thale cress | mitochondrion | 86.04 | 73.91 |
| VIT_01s0026g00340.t01 | Wine grape | cytosol | 78.98 | 70.12 |
| VIT_19s0015g00470.t01 | Wine grape | cytosol | 78.82 | 69.97 |
| KRH69521 | Soybean | endoplasmic reticulum, nucleus | 78.82 | 67.61 |
| Zm00001d027762_P001 | Maize | cytosol | 23.97 | 66.97 |
| KRH74628 | Soybean | endoplasmic reticulum | 78.33 | 66.53 |
| HORVU1Hr1G057910.4 | Barley | cytosol | 43.35 | 66.33 |
| TraesCS1B01G248400.1 | Wheat | cytosol | 62.73 | 64.75 |
| PGSC0003DMT400097200 | Potato | cytosol, mitochondrion | 43.68 | 64.41 |
| CDY21715 | Canola | cytosol | 65.52 | 63.53 |
| TraesCS3B01G080400.1 | Wheat | golgi, unclear | 71.59 | 61.76 |
| TraesCS3D01G066900.1 | Wheat | mitochondrion | 71.59 | 61.58 |
| TraesCS3A01G067300.1 | Wheat | mitochondrion | 71.26 | 61.3 |
| HORVU3Hr1G012410.6 | Barley | mitochondrion | 72.09 | 60.47 |
| Os08t0295300-01 | Rice | golgi, plasma membrane | 73.73 | 60.27 |
| TraesCS1A01G235200.1 | Wheat | cytosol | 67.49 | 59.91 |
| Zm00001d032667_P005 | Maize | mitochondrion | 71.1 | 58.75 |
| EER91117 | Sorghum | mitochondrion | 71.1 | 58.59 |
| TraesCS1D01G236900.1 | Wheat | cytosol, mitochondrion | 58.29 | 58.29 |
| CDY21726 | Canola | cytosol | 41.38 | 57.8 |
| CDX81854 | Canola | cytosol | 40.72 | 57.27 |
| Zm00001d013607_P003 | Maize | mitochondrion | 70.94 | 52.81 |
| Solyc07g064750.1.1 | Tomato | cytosol | 15.27 | 38.27 |
| GSMUA_Achr1P18790_001 | Banana | cytosol | 15.76 | 35.16 |
| CDY50043 | Canola | plastid | 36.62 | 34.2 |
| CDX93065 | Canola | plastid | 36.45 | 33.69 |
Protein Annotations
Description
BnaA09g04070DBnaA09g04070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G2V7]
Coordinates
chrLK032100:-:234085..237834
Molecular Weight (calculated)
70038.5 Da
IEP (calculated)
6.462
GRAVY (calculated)
-0.419
Length
609 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIAGEISKG LANSALISSV NDELWDMSRV LEGDCKLELF KFDSDKGRDT LWHSSAHVLG QALEQEYGCH LCIGPCTTRG EGFYYDAFYG DLGLNDNHFP
101: NIEAGAAKAA KEAQPFERIE VTKDQAIEMF SDNNFKVEII NDLPADKTIT VYRCGPLVDL CRGPHIPNTS FVKAFKCLRA SSAYWRGSKD RESLQRVYGI
201: SYPDQKQLKK YLQFLEEAKK YDHRLLGQKQ ELYFCHPLSP GSWFFLPLST RIYNKLMEFI KEQYWKRGYI EVITPNMYNM NLWETSGHAA NYKENMFTFD
301: IEKQEFGLKP MNCPGYCLMF QHKVRSYREL PIRLADFGVL HRNEASGALS GLTRVRRFQQ DDAHIFCTED QVTDEVKAVL EFIDYAYKIF GFTYELKLST
401: RPEKYLGDLA TWDKAENDLK IALDAFGKKW VLNEGDGAFY GPKIDITVSD AMNRKFQCAT LQLDFQLPDR FKLEYSADDE AKRQRPVMIH RAVLGSVERM
501: FAIVLEHYKG KWPFWLSPRQ AIVCPISKKS EEYALQVKKQ IHEAGYYETI LGLGVREAQL AQYNYILVVG ETEAATGQVS VRIRDSAAHS VKSIENLLEE
601: FKTKTAEYQ
101: NIEAGAAKAA KEAQPFERIE VTKDQAIEMF SDNNFKVEII NDLPADKTIT VYRCGPLVDL CRGPHIPNTS FVKAFKCLRA SSAYWRGSKD RESLQRVYGI
201: SYPDQKQLKK YLQFLEEAKK YDHRLLGQKQ ELYFCHPLSP GSWFFLPLST RIYNKLMEFI KEQYWKRGYI EVITPNMYNM NLWETSGHAA NYKENMFTFD
301: IEKQEFGLKP MNCPGYCLMF QHKVRSYREL PIRLADFGVL HRNEASGALS GLTRVRRFQQ DDAHIFCTED QVTDEVKAVL EFIDYAYKIF GFTYELKLST
401: RPEKYLGDLA TWDKAENDLK IALDAFGKKW VLNEGDGAFY GPKIDITVSD AMNRKFQCAT LQLDFQLPDR FKLEYSADDE AKRQRPVMIH RAVLGSVERM
501: FAIVLEHYKG KWPFWLSPRQ AIVCPISKKS EEYALQVKKQ IHEAGYYETI LGLGVREAQL AQYNYILVVG ETEAATGQVS VRIRDSAAHS VKSIENLLEE
601: FKTKTAEYQ
001: MLLRLTARSI RRFTTSSSSL PLLSSSSFCT VPTMAANHPK DEAYLSAVIP KRIKLFEQIQ ANQLENLKSL PHDPIKVTLP DGNVKEGKKW ETTPMDIAAQ
101: ISKGLANSAL ISAVDDVLWD MNRPLEGDCK LELFKFDSDK GRDTLWHSSA HILGQALEQE YGCQLCIGPC TTRGEGFYYD GFYGELGLSD NHFPSIEAGA
201: AKAAKEAQPF ERIEVTKDQA LEMFSENNFK VELINGLPAD MTITVYRCGP LVDLCRGPHI PNTSFVKAFK CLRASSAYWK GDKDRESLQR VYGISYPDQK
301: QLKKYLQFLE EAKKYDHRLL GQKQELFFSH QLSPGSYFFL PLGTRVYNRL MDFIKNQYWH RGYTEVITPN MYNMELWQTS GHADNYKDNM FTFNIEKQEF
401: GLKPMNCPGH CLIFQHRVRS YRELPMRLAD FGVLHRNEAS GALSGLTRVR RFQQDDAHIF CTTEQVKGEV QGVLEFIDYV YKVFGFTYEL KLSTRPEKYL
501: GDLETWDKAE ADLKEAIEAF GKPLVLNEGD GAFYGPKIDI TVSDAMNRKF QCATLQLDFQ LPIRFNLEYA AEDEAKKSRP VMIHRAVLGS VERMFAILLE
601: HYKGKWPFWI SPRQAIVCPI SEKSQQYAEK VQKQIKDAGF YVDADLTDRK IDKKVREAQL AQYNYILVVG ETEAATGQVS VRVRDNAAHS VKSIEDLLEE
701: FKAKTAEFV
101: ISKGLANSAL ISAVDDVLWD MNRPLEGDCK LELFKFDSDK GRDTLWHSSA HILGQALEQE YGCQLCIGPC TTRGEGFYYD GFYGELGLSD NHFPSIEAGA
201: AKAAKEAQPF ERIEVTKDQA LEMFSENNFK VELINGLPAD MTITVYRCGP LVDLCRGPHI PNTSFVKAFK CLRASSAYWK GDKDRESLQR VYGISYPDQK
301: QLKKYLQFLE EAKKYDHRLL GQKQELFFSH QLSPGSYFFL PLGTRVYNRL MDFIKNQYWH RGYTEVITPN MYNMELWQTS GHADNYKDNM FTFNIEKQEF
401: GLKPMNCPGH CLIFQHRVRS YRELPMRLAD FGVLHRNEAS GALSGLTRVR RFQQDDAHIF CTTEQVKGEV QGVLEFIDYV YKVFGFTYEL KLSTRPEKYL
501: GDLETWDKAE ADLKEAIEAF GKPLVLNEGD GAFYGPKIDI TVSDAMNRKF QCATLQLDFQ LPIRFNLEYA AEDEAKKSRP VMIHRAVLGS VERMFAILLE
601: HYKGKWPFWI SPRQAIVCPI SEKSQQYAEK VQKQIKDAGF YVDADLTDRK IDKKVREAQL AQYNYILVVG ETEAATGQVS VRVRDNAAHS VKSIEDLLEE
701: FKAKTAEFV
Arabidopsis Description
THRRSThreonine--tRNA ligase, mitochondrial 1 [Source:UniProtKB/Swiss-Prot;Acc:O04630]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.