Factsheet for HORVU3Hr1G012410.6

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G066900.1	Wheat	mitochondrion	91.32	93.64
TraesCS3A01G067300.1	Wheat	mitochondrion	91.18	93.5
TraesCS3B01G080400.1	Wheat	golgi, unclear	90.63	93.2
GSMUA_Achr1P18800_001	Banana	cytosol	57.71	80.89
Os08t0295300-01	Rice	golgi, plasma membrane	82.09	80.0
Zm00001d032667_P005	Maize	mitochondrion	79.06	77.88
HORVU1Hr1G057910.4	Barley	cytosol	42.42	77.39
EER91117	Sorghum	mitochondrion	77.96	76.59
Zm00001d027762_P001	Maize	cytosol	22.86	76.15
VIT_01s0026g00340.t01	Wine grape	cytosol	70.39	74.49
VIT_19s0015g00470.t01	Wine grape	cytosol	69.97	74.05
Solyc08g074550.2.1	Tomato	plastid	68.87	73.96
CDY19754	Canola	cytosol	60.47	72.09
KRH69521	Soybean	endoplasmic reticulum, nucleus	68.87	70.42
KRH74628	Soybean	endoplasmic reticulum	69.15	70.01
Zm00001d013607_P003	Maize	mitochondrion	78.24	69.44
Solyc05g005800.2.1	Tomato	plastid	68.73	68.83
AT5G26830.1	Thale cress	mitochondrion	66.25	67.84
CDX88245	Canola	mitochondrion	66.94	67.69
Bra009922.1-P	Field mustard	mitochondrion	66.94	67.69
PGSC0003DMT400097200	Potato	cytosol, mitochondrion	38.29	67.31
Bra036596.1-P	Field mustard	mitochondrion	65.43	67.19
CDX80596	Canola	extracellular	65.7	66.81
CDX87030	Canola	mitochondrion, plastid	65.15	65.79
PGSC0003DMT400076047	Potato	cytosol	17.77	64.18
Bra031021.1-P	Field mustard	cytosol	49.45	62.22
CDY21715	Canola	cytosol	53.58	61.94
AT1G17960.1	Thale cress	cytosol	38.02	60.26
Bra031009.1-P	Field mustard	cytosol	28.1	54.69
CDY21726	Canola	cytosol	32.78	54.59
CDX81854	Canola	cytosol	32.37	54.27
AT1G18130.1	Thale cress	cytosol	11.98	52.73
Solyc07g064750.1.1	Tomato	cytosol	13.09	39.09
HORVU6Hr1G070790.5	Barley	plastid	33.88	35.5

Protein Annotations

KEGG:00970+6.1.1.3	MapMan:17.2.19	Gene3D:3.10.20.30	Gene3D:3.30.930.10	Gene3D:3.30.980.10	Gene3D:3.40.50.800
UniProt:A0A287K4G5	InterPro:Anticodon-bd	InterPro:Anticodon-bd_dom_sf	InterPro:Beta-grasp_dom_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004812	GO:GO:0004829	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418
GO:GO:0006435	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
GO:GO:0043039	EnsemblPlantsGene:HORVU3Hr1G012410	EnsemblPlants:HORVU3Hr1G012410.6	InterPro:IPR006195	InterPro:IPR012675	InterPro:IPR036621
HAMAP:MF_00184	PFAM:PF00587	PFAM:PF02824	PFAM:PF03129	PFAM:PF07973	PRINTS:PR01047
PFscan:PS50862	PANTHER:PTHR11451	PANTHER:PTHR11451:SF46	SMART:SM00863	SUPFAM:SSF52954	SUPFAM:SSF55186
SUPFAM:SSF55681	SUPFAM:SSF81271	InterPro:TGS	InterPro:TGS-like	TIGRFAMs:TIGR00418	InterPro:Thr-tRNA-ligase_IIa
InterPro:Thr/Ala-tRNA-synth_IIc_edit	InterPro:ThrRS_core	UniParc:UPI000B481CF2	InterPro:aa-tRNA-synt_IIb	InterPro:aa-tRNA-synth_II	SEG:seg
InterPro:tRNA_SAD	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:26934313..26955710

Molecular Weight (calculated)

82656.7 Da

IEP (calculated)

8.004

GRAVY (calculated)

-0.295

Length

726 amino acids

Sequence
(BLAST)

001: LGLKPTPSTP PRRRYMLACL RRGLSLLRPP QPRLPPRPAR LLLHLSAGPM GDPAVAPDAA YLAVVTPKRI RIFEEIQARQ ALERLNIGGD PIRVTLPDGA
101: IKEGKKWIST PMDIATGIST GLAASCLIAQ VNGVLWDMTR PLEGDCDLKL FKFDSNEGRD TFWHSSAHIL GESLERVYGC KLCIGPCTTR GEGFYYDAHY
201: KDLTLNDTHF GLIDKQAKKA VAEKQPFERI EVSRAEALEI FAENEFKVEI INELPEDKTI TVYRCGPLVD LCRGPHIPNT SFVKAFACLK ASASYWRGKA
301: DRESLQRVYG ISFPDSKRLK EYLHMIEEAK KRDHRLLGQS QELFFFHPLS PGSCFFLPNG AIIYNKLMDF LRKEYRERGY REVLSPNIYN MQLWETSGHA
401: ANYKDNMFVF EIEKQEFGLK PMNCPGHCLM FGHKVRSYRE LPLRMADFGV LHRNELSGAL TGLTRVRRFQ QDDAHIFCTE SQIKDEVGAC LEFIDYVYKI
501: FGFQYELELS TRPEKYLGDI ETWNKAEQQL TEALNEFGKP WKINEADGAF YGPKIDIGVF DALKRKFQCA TLQLDFQLPL RFKLTYSAED EAKLERPVMI
601: HRAILGSVER MFAILLEHYN GKWPLWLSPR QAIVCCVSSN SLAYAKEVHA QIHAAGFHVD IDMTDRTIQK KVREAQLAQF NYILVVGAKE AESGKVVLRV
701: RDKADLSTES IADVIARFSD EVASFK

Best Arabidopsis Sequence Match ( AT5G26830.1 )
(BLAST)

001: MLLRLTARSI RRFTTSSSSL PLLSSSSFCT VPTMAANHPK DEAYLSAVIP KRIKLFEQIQ ANQLENLKSL PHDPIKVTLP DGNVKEGKKW ETTPMDIAAQ
101: ISKGLANSAL ISAVDDVLWD MNRPLEGDCK LELFKFDSDK GRDTLWHSSA HILGQALEQE YGCQLCIGPC TTRGEGFYYD GFYGELGLSD NHFPSIEAGA
201: AKAAKEAQPF ERIEVTKDQA LEMFSENNFK VELINGLPAD MTITVYRCGP LVDLCRGPHI PNTSFVKAFK CLRASSAYWK GDKDRESLQR VYGISYPDQK
301: QLKKYLQFLE EAKKYDHRLL GQKQELFFSH QLSPGSYFFL PLGTRVYNRL MDFIKNQYWH RGYTEVITPN MYNMELWQTS GHADNYKDNM FTFNIEKQEF
401: GLKPMNCPGH CLIFQHRVRS YRELPMRLAD FGVLHRNEAS GALSGLTRVR RFQQDDAHIF CTTEQVKGEV QGVLEFIDYV YKVFGFTYEL KLSTRPEKYL
501: GDLETWDKAE ADLKEAIEAF GKPLVLNEGD GAFYGPKIDI TVSDAMNRKF QCATLQLDFQ LPIRFNLEYA AEDEAKKSRP VMIHRAVLGS VERMFAILLE
601: HYKGKWPFWI SPRQAIVCPI SEKSQQYAEK VQKQIKDAGF YVDADLTDRK IDKKVREAQL AQYNYILVVG ETEAATGQVS VRVRDNAAHS VKSIEDLLEE
701: FKAKTAEFV

Arabidopsis Description

THRRSThreonine--tRNA ligase, mitochondrial 1 [Source:UniProtKB/Swiss-Prot;Acc:O04630]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.