CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031021.1-P	Field mustard	cytosol	90.92	98.96
CDY19754	Canola	cytosol	63.53	65.52
CDY21726	Canola	cytosol	43.95	63.3
AT1G18130.1	Thale cress	cytosol	16.56	63.03
CDX80596	Canola	extracellular	71.5	62.89
CDX88245	Canola	mitochondrion	71.66	62.67
CDX81854	Canola	cytosol	43.15	62.59
CDX87030	Canola	mitochondrion, plastid	70.7	61.75
VIT_01s0026g00340.t01	Wine grape	cytosol	67.2	61.52
VIT_19s0015g00470.t01	Wine grape	cytosol	66.56	60.93
PGSC0003DMT400097200	Potato	cytosol, mitochondrion	38.69	58.84
KRH69521	Soybean	endoplasmic reticulum, nucleus	66.4	58.73
KRH74628	Soybean	endoplasmic reticulum	66.08	57.88
TraesCS3D01G066900.1	Wheat	mitochondrion	61.78	54.8
TraesCS3A01G067300.1	Wheat	mitochondrion	61.78	54.8
TraesCS3B01G080400.1	Wheat	golgi, unclear	61.47	54.67
TraesCS1D01G236900.1	Wheat	cytosol, mitochondrion	52.71	54.35
TraesCS1A01G235200.1	Wheat	cytosol	58.76	53.79
HORVU3Hr1G012410.6	Barley	mitochondrion	61.94	53.58
TraesCS1B01G248400.1	Wheat	cytosol	50.32	53.56
Os08t0295300-01	Rice	golgi, plasma membrane	63.38	53.42
Zm00001d032667_P005	Maize	mitochondrion	62.26	53.05
EER91117	Sorghum	mitochondrion	61.78	52.5
HORVU1Hr1G057910.4	Barley	cytosol	32.8	51.76
Zm00001d027762_P001	Maize	cytosol	17.2	49.54
Zm00001d013607_P003	Maize	mitochondrion	61.94	47.55
GSMUA_Achr1P18790_001	Banana	cytosol	16.88	38.83
Solyc07g064750.1.1	Tomato	cytosol	12.74	32.92
CDY50043	Canola	plastid	30.1	28.99
CDX93065	Canola	plastid	29.62	28.22

Protein Annotations

KEGG:00970+6.1.1.3	MapMan:17.2.19	Gene3D:3.10.20.30	Gene3D:3.30.930.10	Gene3D:3.30.980.10	Gene3D:3.40.50.800
GO:A0A078G5H0	UniProt:A0A078G5H0	InterPro:Anticodon-bd	InterPro:Anticodon-bd_dom_sf	InterPro:Beta-grasp_dom_sf	EnsemblPlants:CDY21715
ProteinID:CDY21715	ProteinID:CDY21715.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812
GO:GO:0004829	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006435	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0043039	EnsemblPlantsGene:GSBRNA2T00016211001
InterPro:IPR006195	InterPro:IPR012675	InterPro:IPR036621	PFAM:PF00587	PFAM:PF02824	PFAM:PF03129
PFAM:PF07973	PRINTS:PR01047	PFscan:PS50862	PANTHER:PTHR11451	PANTHER:PTHR11451:SF46	SMART:SM00863
SUPFAM:SSF52954	SUPFAM:SSF55186	SUPFAM:SSF55681	SUPFAM:SSF81271	InterPro:TGS	InterPro:TGS-like
TIGRFAMs:TIGR00418	InterPro:Thr-tRNA-ligase_IIa	InterPro:Thr/Ala-tRNA-synth_IIc_edit	InterPro:ThrRS_core	UniParc:UPI0004EE0ED4	InterPro:aa-tRNA-synt_IIb
InterPro:aa-tRNA-synth_II	InterPro:tRNA_SAD	:	:	:	:

Description

BnaA09g44660DBnaA09g44660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G5H0]

Coordinates

chrLK032123:-:348732..353072

Molecular Weight (calculated)

72257.5 Da

IEP (calculated)

5.777

GRAVY (calculated)

-0.455

Length

628 amino acids

Sequence
(BLAST)

001: MADEHPRDEA YLSAVIEKRI RLFEEFQAKQ LAEIQSRPHD PIKVTIRDGG NVKEGKRWET TPAEIARQIS VGLANSALIS SVNDVLWDMN RPLEADCSLE
101: FFSFDSDKGR DTFWRSSAHI CRCEYGCKLC VGPCKARDEG FFYDAFYGDL GLNEQHFPET EAGDAREGHP FERIEVTRGQ ALEMFPDDNT FKAELLTEDK
201: TTVYRCGPLV DLCSGPHIPN TSFVKAFKCL NLLSVLLGHH HQLFFCHPLS PGSWFFEKHG TRVYNKLMHF IGNEYRKRGY EEVISPNIYN MKLWETSGHA
301: ANYKENMYTF DIDKQEFGLK PMNCPGHCLM FQHRLRSYKE LPIRLADFGV LHRNEASEAL SGLTHTRRFQ QDDAHIFCTK DQVSGELKRA LEFVDYVYTK
401: FGFTYELKLS TRPEKYLGDL TTWDRAERDL EEALEDFGKP FLVNRGAGEF YGPKIDITVS DAMKSYVQCA TLQLDFQLPA LFELEYTAMA EGSSDTPVMI
501: HRAVLGSVER MFTTLVEHYK GKWPFWLSPR QAIVCSLSKD SHEYAEKVRE QIHEAGYYVD VDITDRNISK KVREAQVAQY NYILVVGAEE TTTGHVTVRR
601: RNEDLSEFPV LSVENLLDEF KLKTANFL

Best Arabidopsis Sequence Match ( AT5G26830.1 )
(BLAST)

001: MLLRLTARSI RRFTTSSSSL PLLSSSSFCT VPTMAANHPK DEAYLSAVIP KRIKLFEQIQ ANQLENLKSL PHDPIKVTLP DGNVKEGKKW ETTPMDIAAQ
101: ISKGLANSAL ISAVDDVLWD MNRPLEGDCK LELFKFDSDK GRDTLWHSSA HILGQALEQE YGCQLCIGPC TTRGEGFYYD GFYGELGLSD NHFPSIEAGA
201: AKAAKEAQPF ERIEVTKDQA LEMFSENNFK VELINGLPAD MTITVYRCGP LVDLCRGPHI PNTSFVKAFK CLRASSAYWK GDKDRESLQR VYGISYPDQK
301: QLKKYLQFLE EAKKYDHRLL GQKQELFFSH QLSPGSYFFL PLGTRVYNRL MDFIKNQYWH RGYTEVITPN MYNMELWQTS GHADNYKDNM FTFNIEKQEF
401: GLKPMNCPGH CLIFQHRVRS YRELPMRLAD FGVLHRNEAS GALSGLTRVR RFQQDDAHIF CTTEQVKGEV QGVLEFIDYV YKVFGFTYEL KLSTRPEKYL
501: GDLETWDKAE ADLKEAIEAF GKPLVLNEGD GAFYGPKIDI TVSDAMNRKF QCATLQLDFQ LPIRFNLEYA AEDEAKKSRP VMIHRAVLGS VERMFAILLE
601: HYKGKWPFWI SPRQAIVCPI SEKSQQYAEK VQKQIKDAGF YVDADLTDRK IDKKVREAQL AQYNYILVVG ETEAATGQVS VRVRDNAAHS VKSIEDLLEE
701: FKAKTAEFV

Arabidopsis Description

THRRSThreonine--tRNA ligase, mitochondrial 1 [Source:UniProtKB/Swiss-Prot;Acc:O04630]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.