CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93065	Canola	plastid	93.71	92.72
AT2G04842.1	Thale cress	plastid	89.26	89.54
VIT_12s0057g00400.t01	Wine grape	plastid	79.6	76.21
Solyc07g048080.2.1	Tomato	nucleus	77.76	75.33
PGSC0003DMT400015710	Potato	mitochondrion, plastid	77.45	75.15
KRG96128	Soybean	nucleus	75.0	75.0
KRH17875	Soybean	mitochondrion	29.14	74.8
KXG36582	Sorghum	plastid	75.92	74.44
TraesCS6D01G262800.1	Wheat	plastid	76.07	74.36
GSMUA_Achr4P01570_001	Banana	plastid	76.07	74.25
TraesCS6A01G282300.1	Wheat	plastid	75.61	73.91
TraesCS6B01G310700.1	Wheat	plastid	73.01	73.57
Os02t0538000-01	Rice	plasma membrane	73.93	71.51
HORVU6Hr1G070790.5	Barley	plastid	75.31	70.85
Zm00001d021962_P001	Maize	plastid	68.86	70.71
CDY19754	Canola	cytosol	34.2	36.62
CDX80596	Canola	extracellular	36.04	32.91
CDY21726	Canola	cytosol	21.93	32.8
CDX88245	Canola	mitochondrion	36.04	32.73
CDX87030	Canola	mitochondrion, plastid	35.89	32.55
CDX81854	Canola	cytosol	21.47	32.33
CDY21715	Canola	cytosol	28.99	30.1

Protein Annotations

KEGG:00970+6.1.1.3	MapMan:17.2.19	Gene3D:3.30.54.20	Gene3D:3.30.930.10	Gene3D:3.30.980.10	Gene3D:3.40.50.800
GO:A0A078ILZ7	UniProt:A0A078ILZ7	InterPro:Anticodon-bd	InterPro:Anticodon-bd_dom_sf	EnsemblPlants:CDY50043	ProteinID:CDY50043
ProteinID:CDY50043.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004829
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006435	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0043039	EnsemblPlantsGene:GSBRNA2T00095799001	InterPro:IPR006195
InterPro:IPR036621	HAMAP:MF_00184	PFAM:PF00587	PFAM:PF03129	PFAM:PF07973	PRINTS:PR01047
PFscan:PS50862	PANTHER:PTHR11451	PANTHER:PTHR11451:SF44	SMART:SM00863	SUPFAM:SSF52954	SUPFAM:SSF55186
SUPFAM:SSF55681	TIGRFAMs:TIGR00418	InterPro:Thr-tRNA-ligase_IIa	InterPro:Thr/Ala-tRNA-synth_IIc_edit	InterPro:ThrRS_core	UniParc:UPI0004EEEC8B
InterPro:aa-tRNA-synt_IIb	InterPro:aa-tRNA-synth_II	SEG:seg	InterPro:tRNA_SAD	:	:

Description

BnaC03g44930DBnaC03g44930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILZ7]

Coordinates

chrLK032876:+:29711..32968

Molecular Weight (calculated)

75060.9 Da

IEP (calculated)

6.609

GRAVY (calculated)

-0.431

Length

652 amino acids

Sequence
(BLAST)

001: MASSRSLLLS SSFLSKPSSF TSSLRRFVYL PSPTPRFYPK RHGFSTVFSV VTEPAAIYST APKKSEPATV PLPSNDSSDK LLKIRHTCAH VMAMAVQKLF
101: PDAKVTIGPW IDNGFYYDFD MEPLTDKDLK RIKKEMDRII SRNLPLLREE VTREEAQRRI MAINEPYKME ILESIEEEPI TVYHIGNEWW DLCAGPHVET
201: TGKINKKAVE LESVAGAYWR GDEKRQMLQR IYGTAWESEE QLKAYLHFKE EAKRRDHRRI GQDLDLFSIQ DEAGGGLVFW HPKGAIVRNI IEESWKKMHV
301: EHGYDLIYTP HIAKADLWKI SGHLDFYREN MYDQMEIEDE LYQLRPMNCP YHILLYQRKR QSYRDLPIRV AELGTVYRYE LSGSLHGLFR VRGFTQDDAH
401: IFCLEDQIKD EIRGVLDLTE EILSRFGFDK YEVNLSTRPE KSVGSDDIWE KATCALKDAL DDKGWSYEVD EGGGAFYGPK IDLKIEDALG RKWQCSTIQV
501: DFNLPQRFDI TYVDTNSDKK RPIMIHRAVL GSLERFFGVL IEHYAGDFPL WLSPVQVRVL PVTDNQLEFC KEVSKKLKAC GVRAELCHGE RLPKLIRNAE
601: TQKIPLMAVV GPKEVETGTV TVRSRFGGEL GTIPVDDFIN KINIAVETRT AL

Best Arabidopsis Sequence Match ( AT2G04842.2 )
(BLAST)

001: MASSHSLLFS SSFLSKPSSF TSSLRRFVYL PTRQFWPRQR HGFSTVFAVA TEPAISSSGP KKAEPSTVVL PSNESSDKLL KIRHTCAHVM AMAVQKLFPD
101: AKVTIGPWID NGFYYDFDME PLTDKDLKRI KKEMDRIISR NLPLLREEVS REEAKKRIMA INEPYKMEIL DGIKEEPITV YHIGNEWWDL CAGPHVETTG
201: KINKKAVELE SVAGAYWRGD EKRQMLQRIY GTAWESEEQL KAYLHFKEEA KRRDHRRIGQ DLDLFSIQDE AGGGLVFWHP KGAIVRNIIE ESWKKMHVEH
301: GYDLIYTPHV AKADLWKISG HLDFYRENMY DQMEIEDELY QLRPMNCPYH ILLYQRKRQS YRDLPIRVAE LGTVYRYELS GSLHGLFRVR GFTQDDAHIF
401: CLEDQIKDEI RGVLDLTEEI LSRFGFNKYE VNLSTRPEKS VGGDDIWEKA TCALRDALDD KGWSYEVDEG GGAFYGPKID LKIEDALGRK WQCSTIQVDF
501: NLPQRFDITY VDTNSDKKRP IMIHRAVLGS LERFFGVLIE HYAGDFPLWL SPVQVRVLPV TDNQLEFCKE VSKKLRACGV RAELCHGERL PKLIRNAETQ
601: KIPLMAVVGP KEVETGTVTV RSRFGGELGT IPVDDLINKI NIAVETRTAL

Arabidopsis Description

EMB2761Threonine--tRNA ligase, chloroplastic/mitochondrial 2 [Source:UniProtKB/Swiss-Prot;Acc:F4IFC5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.