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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr8P00730_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G04842.1 GSMUA_Achr8P00730_001 AT5G40930.1 21848659
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH17875 Soybean mitochondrion 30.24 79.53
KRG96128 Soybean nucleus 75.0 76.84
Bra013193.1-P Field mustard plastid 74.4 76.23
KXG36582 Sorghum plastid 75.75 76.09
CDY50043 Canola plastid 74.25 76.07
CDX93065 Canola plastid 74.55 75.57
Os02t0538000-01 Rice plasma membrane 76.2 75.52
AT2G04842.1 Thale cress plastid 73.35 75.38
TraesCS6D01G262800.1 Wheat plastid 74.7 74.81
VIT_12s0057g00400.t01 Wine grape plastid 76.05 74.6
TraesCS6A01G282300.1 Wheat plastid 74.25 74.36
TraesCS6B01G310700.1 Wheat plastid 71.71 74.03
Solyc07g048080.2.1 Tomato nucleus 73.8 73.25
Zm00001d021962_P001 Maize plastid 69.46 73.07
PGSC0003DMT400015710 Potato mitochondrion, plastid 73.5 73.07
HORVU6Hr1G070790.5 Barley plastid 74.55 71.86
GSMUA_Achr1P18800_001 Banana cytosol 31.44 40.54
GSMUA_Achr1P18790_001 Banana cytosol 5.84 14.29
Protein Annotations
KEGG:00970+6.1.1.3MapMan:17.2.19Gene3D:3.30.54.20Gene3D:3.30.930.10Gene3D:3.30.980.10Gene3D:3.40.50.800
InterPro:Anticodon-bdInterPro:Anticodon-bd_dom_sfGO:GO:0000003GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004812GO:GO:0004829GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0006139GO:GO:0006412GO:GO:0006418
GO:GO:0006435GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009507
GO:GO:0009536GO:GO:0009570GO:GO:0009790GO:GO:0009791GO:GO:0009793GO:GO:0009987
GO:GO:0019538GO:GO:0043039EnsemblPlantsGene:GSMUA_Achr4G01570_001EnsemblPlants:GSMUA_Achr4P01570_001EnsemblPlants:GSMUA_Achr4T01570_001InterPro:IPR006195
InterPro:IPR036621UniProt:M0SK74HAMAP:MF_00184PFAM:PF00587PFAM:PF03129PFAM:PF07973
PRINTS:PR01047PFscan:PS50862PANTHER:PTHR11451PANTHER:PTHR11451:SF44SMART:SM00863SUPFAM:SSF52954
SUPFAM:SSF55186SUPFAM:SSF55681TIGRFAMs:TIGR00418InterPro:Thr-tRNA-ligase_IIaInterPro:Thr/Ala-tRNA-synth_IIc_editInterPro:ThrRS_core
UniParc:UPI0002969723InterPro:aa-tRNA-synt_IIbInterPro:aa-tRNA-synth_IISEG:segInterPro:tRNA_SAD:
Description
Threonyl-tRNA synthetase [Source:GMGC_GENE;Acc:GSMUA_Achr4G01570_001]
Coordinates
chr4:+:1309865..1316981
Molecular Weight (calculated)
76652.3 Da
IEP (calculated)
7.891
GRAVY (calculated)
-0.442
Length
668 amino acids
Sequence
(BLAST)
001: MAAASPSSLL LPRPQTLSRP LLNGRLPSPP ATRRIPSLPF WYPTRDPRRF AASSSPSPSA VEGKPKLDAK NGGRSAKDKG KSLREQRIVL PTNESSEKLL
101: RIRHTCAHVM AMAVQRLFPG SKVTIGPWID NGFYYDFDME PLTDKDLKRI KKEMDRIINR NLPLIREEVS REEAQTRIMA VNEPYKLKIL ESIEEEPITI
201: YHIGNEWWDL CAGPHVDSTG HIDKKAVELE SVAGAYWRGD VSKPMLQRIY GTAWETEEQL KAYLHLKEEA KRRDHRRLGQ DLDLFSIQED AGGGLVFWHP
301: KGATVRHIIE DSWKKIHLQH GYDLLYTPHV AKADLWKVSG HLDFYKENMY DQMNIEDELY QLRPMNCPYH ILVYKRKLHS YRDLPMRVAE LGTVYRYELS
401: GSLHGLFRVR GFTQDDAHIF CLDDQIKNEI RGVLDLTEEI LLQFGFKKYE VNLSTRPEKF VGTDDIWEKA TIALRDALDD KGWAYQIDEG GGAFYGPKID
501: LKIEDALGRK WQCSTVDFNL PERFDISYVD SNAEKRRPIM IHRAVLGSLE RFFGVLIEHY AGDFPLWISP IQARVLPVTD TEVKYCTEVV SKLNSIGIRA
601: ELCYGERLPK LIRNAEKQKV PLMAVVGPKE VETQMVTVRS RFGGELGMMT IDEFIARIQL AVSNRTSL
Best Arabidopsis Sequence Match ( AT2G04842.2 )
(BLAST)
001: MASSHSLLFS SSFLSKPSSF TSSLRRFVYL PTRQFWPRQR HGFSTVFAVA TEPAISSSGP KKAEPSTVVL PSNESSDKLL KIRHTCAHVM AMAVQKLFPD
101: AKVTIGPWID NGFYYDFDME PLTDKDLKRI KKEMDRIISR NLPLLREEVS REEAKKRIMA INEPYKMEIL DGIKEEPITV YHIGNEWWDL CAGPHVETTG
201: KINKKAVELE SVAGAYWRGD EKRQMLQRIY GTAWESEEQL KAYLHFKEEA KRRDHRRIGQ DLDLFSIQDE AGGGLVFWHP KGAIVRNIIE ESWKKMHVEH
301: GYDLIYTPHV AKADLWKISG HLDFYRENMY DQMEIEDELY QLRPMNCPYH ILLYQRKRQS YRDLPIRVAE LGTVYRYELS GSLHGLFRVR GFTQDDAHIF
401: CLEDQIKDEI RGVLDLTEEI LSRFGFNKYE VNLSTRPEKS VGGDDIWEKA TCALRDALDD KGWSYEVDEG GGAFYGPKID LKIEDALGRK WQCSTIQVDF
501: NLPQRFDITY VDTNSDKKRP IMIHRAVLGS LERFFGVLIE HYAGDFPLWL SPVQVRVLPV TDNQLEFCKE VSKKLRACGV RAELCHGERL PKLIRNAETQ
601: KIPLMAVVGP KEVETGTVTV RSRFGGELGT IPVDDLINKI NIAVETRTAL
Arabidopsis Description
EMB2761Threonine--tRNA ligase, chloroplastic/mitochondrial 2 [Source:UniProtKB/Swiss-Prot;Acc:F4IFC5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.