CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013193.1-P	Field mustard	plastid	96.66	97.7
CDY50043	Canola	plastid	92.72	93.71
AT2G04842.1	Thale cress	plastid	87.56	88.77
KRG96128	Soybean	nucleus	75.57	76.38
VIT_12s0057g00400.t01	Wine grape	plastid	78.15	75.62
KRH17875	Soybean	mitochondrion	29.14	75.59
Solyc07g048080.2.1	Tomato	nucleus	77.09	75.48
PGSC0003DMT400015710	Potato	mitochondrion, plastid	76.63	75.15
GSMUA_Achr4P01570_001	Banana	plastid	75.57	74.55
KXG36582	Sorghum	plastid	75.11	74.44
TraesCS6D01G262800.1	Wheat	plastid	75.11	74.21
TraesCS6A01G282300.1	Wheat	plastid	74.81	73.91
TraesCS6B01G310700.1	Wheat	plastid	72.23	73.57
Os02t0538000-01	Rice	plasma membrane	73.6	71.96
HORVU6Hr1G070790.5	Barley	plastid	74.66	71.0
Zm00001d021962_P001	Maize	plastid	68.13	70.71
CDY19754	Canola	cytosol	33.69	36.45
CDY21726	Canola	cytosol	21.7	32.8
CDX80596	Canola	extracellular	35.51	32.77
CDX88245	Canola	mitochondrion	35.51	32.59
CDX87030	Canola	mitochondrion, plastid	35.36	32.41
CDX81854	Canola	cytosol	21.24	32.33
CDY21715	Canola	cytosol	28.22	29.62

Protein Annotations

KEGG:00970+6.1.1.3	MapMan:17.2.19	Gene3D:3.30.54.20	Gene3D:3.30.930.10	Gene3D:3.30.980.10	Gene3D:3.40.50.800
GO:A0A078DUT2	InterPro:Anticodon-bd	InterPro:Anticodon-bd_dom_sf	EnsemblPlants:CDX93065	ProteinID:CDX93065	ProteinID:CDX93065.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004829	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006412	GO:GO:0006418	GO:GO:0006435	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	GO:GO:0043039	EnsemblPlantsGene:GSBRNA2T00154972001	InterPro:IPR006195	InterPro:IPR036621
HAMAP:MF_00184	PFAM:PF00587	PFAM:PF03129	PFAM:PF07973	PRINTS:PR01047	PFscan:PS50862
PANTHER:PTHR11451	PANTHER:PTHR11451:SF44	SMART:SM00863	SUPFAM:SSF52954	SUPFAM:SSF55186	SUPFAM:SSF55681
TIGRFAMs:TIGR00418	InterPro:Thr-tRNA-ligase_IIa	InterPro:Thr/Ala-tRNA-synth_IIc_edit	InterPro:ThrRS_core	UniParc:UPI0004EF1690	InterPro:aa-tRNA-synt_IIb
InterPro:aa-tRNA-synth_II	SEG:seg	InterPro:tRNA_SAD	:	:	:

Description

BnaA03g37870D

Coordinates

chrLK031874:-:1030282..1033416

Molecular Weight (calculated)

75655.7 Da

IEP (calculated)

6.899

GRAVY (calculated)

-0.438

Length

659 amino acids

Sequence
(BLAST)

001: MASSRSLLLS SSFLSKPSSF LSKPSSFTSS LRRFVYLPSP TPRFYPKRHG FSTVLSVATE PAAISSTAPK KSEPSTVPLP SNDSSDKLLK IRHTCAHVMA
101: MAVQKLFPDA KVTIGPWIDN GFYYDFDMEP LTDKDLKRIK KEMDRIISRN LPLLREEVSR EEAQKRIMAI NEPYKMEILE SIKEEPITVY HIGNEWWDLC
201: AGPHVETTGK INKKAVELES VAGAYWRGDE KRQMLQRIYG TAWENEEQLK AYLHFKEEAK RRDHRRIGQD LDLFSIQDEA GGGLVFWHPK GAIVRNIIEE
301: SWKKMHVEHG YDLIYTPHVA KADLWKISGH LDFYRENMYD QMEIEDELYQ LRPMNCPYHI LLYQRKRQSY RDLPIRVAEL GTVYRYELSG SLHGLFRVRG
401: FTQDDAHIFC LEDQIKDEIR GVLDLTEEIL SRFGFDKYEV NLSTRPEKSV GSDDIWEKAT CALKDALDDK GWSYEVDEGG GAFYGPKIDL KIEDALGRKW
501: QCSTIQVDFN LPQRFDITYV DTNSDKKRPI MIHRAVLGSL ERFFGVLIEH YAGDFPLWLS PVQVRVLPVT DNQLEFCKEV SKKLKACGVR AELCHGERLP
601: KLIRNAETQK IPLMAVVGPK EVETGTVTVR SRFGGELGTI PVDDFINKIN IAVETRTAL

Best Arabidopsis Sequence Match ( AT2G04842.2 )
(BLAST)

001: MASSHSLLFS SSFLSKPSSF TSSLRRFVYL PTRQFWPRQR HGFSTVFAVA TEPAISSSGP KKAEPSTVVL PSNESSDKLL KIRHTCAHVM AMAVQKLFPD
101: AKVTIGPWID NGFYYDFDME PLTDKDLKRI KKEMDRIISR NLPLLREEVS REEAKKRIMA INEPYKMEIL DGIKEEPITV YHIGNEWWDL CAGPHVETTG
201: KINKKAVELE SVAGAYWRGD EKRQMLQRIY GTAWESEEQL KAYLHFKEEA KRRDHRRIGQ DLDLFSIQDE AGGGLVFWHP KGAIVRNIIE ESWKKMHVEH
301: GYDLIYTPHV AKADLWKISG HLDFYRENMY DQMEIEDELY QLRPMNCPYH ILLYQRKRQS YRDLPIRVAE LGTVYRYELS GSLHGLFRVR GFTQDDAHIF
401: CLEDQIKDEI RGVLDLTEEI LSRFGFNKYE VNLSTRPEKS VGGDDIWEKA TCALRDALDD KGWSYEVDEG GGAFYGPKID LKIEDALGRK WQCSTIQVDF
501: NLPQRFDITY VDTNSDKKRP IMIHRAVLGS LERFFGVLIE HYAGDFPLWL SPVQVRVLPV TDNQLEFCKE VSKKLRACGV RAELCHGERL PKLIRNAETQ
601: KIPLMAVVGP KEVETGTVTV RSRFGGELGT IPVDDLINKI NIAVETRTAL

Arabidopsis Description

EMB2761Threonine--tRNA ligase, chloroplastic/mitochondrial 2 [Source:UniProtKB/Swiss-Prot;Acc:F4IFC5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.