Factsheet for HORVU1Hr1G057910.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G248400.1	Wheat	cytosol	81.66	55.08
TraesCS1A01G235200.1	Wheat	cytosol	90.95	52.77
Zm00001d027762_P001	Maize	cytosol	28.14	51.38
TraesCS1D01G236900.1	Wheat	cytosol, mitochondrion	71.61	46.8
PGSC0003DMT400076047	Potato	cytosol	23.62	46.77
CDY19754	Canola	cytosol	66.33	43.35
GSMUA_Achr1P18800_001	Banana	cytosol	56.28	43.24
Os08t0295300-01	Rice	golgi, plasma membrane	79.9	42.68
HORVU3Hr1G012410.6	Barley	mitochondrion	77.39	42.42
VIT_01s0026g00340.t01	Wine grape	cytosol	72.61	42.13
Solyc08g074550.2.1	Tomato	plastid	71.36	42.01
VIT_19s0015g00470.t01	Wine grape	cytosol	71.86	41.69
Zm00001d032667_P005	Maize	mitochondrion	76.88	41.52
EER91117	Sorghum	mitochondrion	75.88	40.87
KRH69521	Soybean	endoplasmic reticulum, nucleus	71.61	40.14
KRH74628	Soybean	endoplasmic reticulum	71.61	39.75
Solyc05g005800.2.1	Tomato	plastid	69.85	38.34
CDX88245	Canola	mitochondrion	67.84	37.6
Bra009922.1-P	Field mustard	mitochondrion	67.84	37.6
CDX80596	Canola	extracellular	67.34	37.53
Bra036596.1-P	Field mustard	mitochondrion	66.33	37.34
CDX87030	Canola	mitochondrion, plastid	67.34	37.27
AT5G26830.1	Thale cress	mitochondrion	66.08	37.09
Zm00001d013607_P003	Maize	mitochondrion	75.88	36.92
CDY21715	Canola	cytosol	51.76	32.8
Bra031021.1-P	Field mustard	cytosol	45.73	31.54
PGSC0003DMT400097200	Potato	cytosol, mitochondrion	30.4	29.3
AT1G17960.1	Thale cress	cytosol	32.91	28.6
Bra031009.1-P	Field mustard	cytosol	23.12	24.66
CDY21726	Canola	cytosol	25.88	23.62
CDX81854	Canola	cytosol	25.38	23.33
HORVU6Hr1G070790.5	Barley	plastid	35.93	20.63
Solyc07g064750.1.1	Tomato	cytosol	11.56	18.93
AT1G18130.1	Thale cress	cytosol	0.75	1.82

Protein Annotations

KEGG:00970+6.1.1.3	MapMan:17.2.19	Gene3D:3.10.20.30	Gene3D:3.30.930.10	Gene3D:3.30.980.10	UniProt:A0A287FRW6
InterPro:Beta-grasp_dom_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004829
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006435	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0043039	EnsemblPlantsGene:HORVU1Hr1G057910	EnsemblPlants:HORVU1Hr1G057910.4
InterPro:IPR006195	InterPro:IPR012675	PFAM:PF00587	PFAM:PF02824	PFAM:PF07973	PRINTS:PR01047
PFscan:PS50862	PANTHER:PTHR11451	PANTHER:PTHR11451:SF46	SMART:SM00863	SUPFAM:SSF55186	SUPFAM:SSF55681
SUPFAM:SSF81271	InterPro:TGS	InterPro:TGS-like	InterPro:Thr-tRNA-ligase_IIa	InterPro:Thr/Ala-tRNA-synth_IIc_edit	UniParc:UPI000B463E91
InterPro:aa-tRNA-synt_IIb	InterPro:aa-tRNA-synth_II	InterPro:tRNA_SAD	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:422180366..422202898

Molecular Weight (calculated)

45636.2 Da

IEP (calculated)

5.353

GRAVY (calculated)

-0.419

Length

398 amino acids

Sequence
(BLAST)

001: MSTPMDITKE ISSALASRCL IAQVNGGLWD MTRPLEDNCE LNLLTFDSKE GRDTLWHSSA HILGEALERV YGCKLCIGPC TTRREGFYYD AYYENATLNG
101: SHFGLIEDRA RRAVVEQPFE RIQVSRDEAL EFFAENKFKV EIINELPEDK PITLYRCGPL VDLCHGPHIP NTSFVKAFAC LKASSSYWRG KADRESLQRA
201: YGISCPDSKL LEDYQDMMEE ATECDHRLLG ESQKLFLFNP LSPGSCFFLA HGTKIVNKLR AFLRQQYRDR GYQEIDGEEF GLKPMNCPGH CIIFKHETRS
301: YRELPLCIAD FGVLHRNEDS GALSGLTRVR RFQQDDAHIF CRESQIKEEV KSVLEFINYV YGIFGFNYEL ELSTRPEKHL GDIETWNKAV QQLAEALD

Best Arabidopsis Sequence Match ( AT2G04842.1 )
(BLAST)

001: MASSHSLLFS SSFLSKPSSF TSSLRRFVYL PTRQFWPRQR HGFSTVFAVA TEPAISSSGP KKAEPSTVVL PSNESSDKLL KIRHTCAHVM AMAVQKLFPD
101: AKVTIGPWID NGFYYDFDME PLTDKDLKRI KKEMDRIISR NLPLLREEVS REEAKKRIMA INEPYKMEIL DGIKEEPITV YHIGNEWWDL CAGPHVETTG
201: KINKKAVELE SVAGAYWRGD EKRQMLQRIY GTAWESEEQL KAYLHFKEEA KRRDHRRIGQ DLDLFSIQDE AGGGLVFWHP KGAIVRNIIE ESWKKMHVEH
301: GYDLIYTPHV AKADLWKISG HLDFYRENMY DQMEIEDELY QLRPMNCPYH ILLYQRKRQS YRDLPIRVAE LGTVYRYELS GSLHGLFRVR GFTQDDAHIF
401: CLEDQIKDEI RGVLDLTEEI LSRFGFNKYE VNLSTRPEKS VGGDDIWEKA TCALRDALDD KGWSYEVDEG GGAFYGPKID LKIEDALGRK WQCSTIQVDF
501: NLPQRFDITY VDTNSDKKRP IMIHRAVLGS LERFFGVLIE HYAGDFPLWL SPVQVRVLPV TDNQLEFCKE VSKKLRACGV RAELCHGERL PKLIRNAETQ
601: KIPLMAVVGP KEVETGTVTV RSRFGGELGT IPVDDLINKI NIAVETRTAL

Arabidopsis Description

EMB2761Threonine--tRNA ligase, chloroplastic/mitochondrial 2 [Source:UniProtKB/Swiss-Prot;Acc:F4IFC5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.