Factsheet for Bra031009.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21726	Canola	cytosol	98.39	84.17
PGSC0003DMT400097200	Potato	cytosol, mitochondrion	52.81	47.7
Bra031021.1-P	Field mustard	cytosol	56.03	36.22
Zm00001d027762_P001	Maize	cytosol	19.84	33.95
VIT_01s0026g00340.t01	Wine grape	cytosol	59.52	32.36
VIT_19s0015g00470.t01	Wine grape	cytosol	59.25	32.22
Bra009922.1-P	Field mustard	mitochondrion	61.39	31.89
Bra036596.1-P	Field mustard	mitochondrion	60.05	31.68
TraesCS1B01G248400.1	Wheat	cytosol	48.26	30.51
KRH69521	Soybean	endoplasmic reticulum, nucleus	57.1	30.0
KRH74628	Soybean	endoplasmic reticulum	57.1	29.71
TraesCS3D01G066900.1	Wheat	mitochondrion	54.69	28.81
TraesCS3B01G080400.1	Wheat	golgi, unclear	54.42	28.75
TraesCS3A01G067300.1	Wheat	mitochondrion	54.42	28.67
Zm00001d032667_P005	Maize	mitochondrion	56.03	28.36
Os08t0295300-01	Rice	golgi, plasma membrane	56.57	28.32
HORVU3Hr1G012410.6	Barley	mitochondrion	54.69	28.1
TraesCS1D01G236900.1	Wheat	cytosol, mitochondrion	45.84	28.08
TraesCS1A01G235200.1	Wheat	cytosol	51.47	27.99
EER91117	Sorghum	mitochondrion	55.23	27.88
Zm00001d013607_P003	Maize	mitochondrion	55.23	25.18
HORVU1Hr1G057910.4	Barley	cytosol	24.66	23.12
Solyc07g064750.1.1	Tomato	cytosol	13.94	21.4
Bra013193.1-P	Field mustard	plastid	30.56	17.48
GSMUA_Achr1P18790_001	Banana	cytosol	5.09	6.96

Protein Annotations

KEGG:00970+6.1.1.3	MapMan:17.2.19	Gene3D:3.30.930.10	Gene3D:3.40.50.800	InterPro:Anticodon-bd	InterPro:Anticodon-bd_dom_sf
EnsemblPlantsGene:Bra031009	EnsemblPlants:Bra031009.1	EnsemblPlants:Bra031009.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004812	GO:GO:0004829	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006435
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR006195
InterPro:IPR036621	UniProt:M4EQD8	PFAM:PF00587	PFAM:PF03129	PRINTS:PR01047	PFscan:PS50862
PANTHER:PTHR11451	SUPFAM:SSF52954	SUPFAM:SSF55681	InterPro:Thr-tRNA-ligase_IIa	UniParc:UPI0002542AE4	InterPro:aa-tRNA-synt_IIb
InterPro:aa-tRNA-synth_II	:	:	:	:	:

Description

AT5G26830 (E=3e-071) | threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS)

Coordinates

chrA09:+:32952254..32954931

Molecular Weight (calculated)

43357.8 Da

IEP (calculated)

6.795

GRAVY (calculated)

-0.444

Length

373 amino acids

Sequence
(BLAST)

001: MADNHPEDEP SLSVVIQNTS SVKQDDLFLC HKMSPGSCFL LPHGTRVYNK LIEFIKKEYW KRGYEEVISP NIYNMKLWET SKDAASYKEN LFTFDIDKQE
101: FGLKSINGPG HCLMFEHRVR SYRELPIRLA EFGVLHLNEA SEALSGLTHT RRFQQDDAHI FCTKEQVKKE VKDVLDFVDY VYTKFGFTYQ LKLLTLDFQL
201: PDHFKLRYSP SDEEKKENVM IHSKVLGTED KEKGVRPVMI HRTVLGSFER MLAILLNHYK GKWPFWISPR QVIVCSSSNN ENHRSYAEEV RRQIHEAGYH
301: VDVDTTDRNI SEKVGEAEIA QYNYILVVGD EEVATRQVTA LLRDSSCSDR SKVPMMSVDA LLDVFKLRIV KFL

Best Arabidopsis Sequence Match ( AT5G26830.1 )
(BLAST)

001: MLLRLTARSI RRFTTSSSSL PLLSSSSFCT VPTMAANHPK DEAYLSAVIP KRIKLFEQIQ ANQLENLKSL PHDPIKVTLP DGNVKEGKKW ETTPMDIAAQ
101: ISKGLANSAL ISAVDDVLWD MNRPLEGDCK LELFKFDSDK GRDTLWHSSA HILGQALEQE YGCQLCIGPC TTRGEGFYYD GFYGELGLSD NHFPSIEAGA
201: AKAAKEAQPF ERIEVTKDQA LEMFSENNFK VELINGLPAD MTITVYRCGP LVDLCRGPHI PNTSFVKAFK CLRASSAYWK GDKDRESLQR VYGISYPDQK
301: QLKKYLQFLE EAKKYDHRLL GQKQELFFSH QLSPGSYFFL PLGTRVYNRL MDFIKNQYWH RGYTEVITPN MYNMELWQTS GHADNYKDNM FTFNIEKQEF
401: GLKPMNCPGH CLIFQHRVRS YRELPMRLAD FGVLHRNEAS GALSGLTRVR RFQQDDAHIF CTTEQVKGEV QGVLEFIDYV YKVFGFTYEL KLSTRPEKYL
501: GDLETWDKAE ADLKEAIEAF GKPLVLNEGD GAFYGPKIDI TVSDAMNRKF QCATLQLDFQ LPIRFNLEYA AEDEAKKSRP VMIHRAVLGS VERMFAILLE
601: HYKGKWPFWI SPRQAIVCPI SEKSQQYAEK VQKQIKDAGF YVDADLTDRK IDKKVREAQL AQYNYILVVG ETEAATGQVS VRVRDNAAHS VKSIEDLLEE
701: FKAKTAEFV

Arabidopsis Description

THRRSThreonine--tRNA ligase, mitochondrial 1 [Source:UniProtKB/Swiss-Prot;Acc:O04630]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.