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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY19754 Canola cytosol 73.91 86.04
CDX87030 Canola mitochondrion, plastid 85.9 84.7
Bra036596.1-P Field mustard mitochondrion 84.34 84.58
CDX80596 Canola extracellular 83.92 83.33
Bra009922.1-P Field mustard mitochondrion 83.22 82.17
CDX88245 Canola mitochondrion 83.22 82.17
VIT_01s0026g00340.t01 Wine grape cytosol 72.92 75.36
VIT_19s0015g00470.t01 Wine grape cytosol 72.78 75.22
KRH69521 Soybean endoplasmic reticulum, nucleus 73.62 73.52
KRH74628 Soybean endoplasmic reticulum 72.78 71.97
AT1G17960.1 Thale cress cytosol 44.99 69.65
TraesCS3B01G080400.1 Wheat golgi, unclear 66.85 67.14
TraesCS3D01G066900.1 Wheat mitochondrion 66.85 66.95
TraesCS3A01G067300.1 Wheat mitochondrion 66.85 66.95
HORVU3Hr1G012410.6 Barley mitochondrion 67.84 66.25
HORVU1Hr1G057910.4 Barley cytosol 37.09 66.08
Zm00001d027762_P001 Maize cytosol 20.17 65.6
TraesCS1B01G248400.1 Wheat cytosol 54.58 65.59
PGSC0003DMT400097200 Potato cytosol, mitochondrion 37.94 65.13
Os08t0295300-01 Rice golgi, plasma membrane 67.7 64.43
TraesCS1A01G235200.1 Wheat cytosol 61.92 63.99
TraesCS1D01G236900.1 Wheat cytosol, mitochondrion 54.58 63.55
Zm00001d032667_P005 Maize mitochondrion 65.87 63.37
EER91117 Sorghum mitochondrion 65.59 62.92
AT1G18130.1 Thale cress cytosol 13.82 59.39
Zm00001d013607_P003 Maize mitochondrion 65.59 56.85
GSMUA_Achr1P18790_001 Banana cytosol 17.91 46.52
Solyc07g064750.1.1 Tomato cytosol 13.4 39.09
AT2G04842.1 Thale cress plastid 31.59 34.46
Protein Annotations
KEGG:00970+6.1.1.3MapMan:17.2.19Gene3D:3.10.20.30Gene3D:3.30.930.10Gene3D:3.30.980.10Gene3D:3.40.50.800
EntrezGene:832741ProteinID:AAB61048.1ProteinID:AED93610.1ArrayExpress:AT5G26830EnsemblPlantsGene:AT5G26830RefSeq:AT5G26830
TAIR:AT5G26830RefSeq:AT5G26830-TAIR-GEnsemblPlants:AT5G26830.1TAIR:AT5G26830.1EMBL:AY048205InterPro:Anticodon-bd
InterPro:Anticodon-bd_dom_sfUnigene:At.23575EMBL:BT005825InterPro:Beta-grasp_dom_sfGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004812GO:GO:0004829GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005618GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005829
GO:GO:0005886GO:GO:0006139GO:GO:0006412GO:GO:0006418GO:GO:0006435GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009507GO:GO:0009536GO:GO:0009987GO:GO:0016020
GO:GO:0016874GO:GO:0019538GO:GO:0030312GO:GO:0043039GO:GO:0046872InterPro:IPR006195
InterPro:IPR012675InterPro:IPR036621HAMAP:MF_00184RefSeq:NP_198035.2UniProt:O04630PFAM:PF00587
PFAM:PF02824PFAM:PF03129PFAM:PF07973PO:PO:0000013PO:PO:0000037PO:PO:0000084
PO:PO:0000230PO:PO:0000293PO:PO:0001016PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007057PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281
PRINTS:PR01047PFscan:PS50862PANTHER:PTHR11451PANTHER:PTHR11451:SF46SMART:SM00863SUPFAM:SSF52954
SUPFAM:SSF55186SUPFAM:SSF55681SUPFAM:SSF81271InterPro:TGSInterPro:TGS-likeTIGRFAMs:TIGR00418
InterPro:Thr-tRNA-ligase_IIaInterPro:Thr/Ala-tRNA-synth_IIc_editInterPro:ThrRS_coreUniParc:UPI00001366ABEMBL:Y14329InterPro:aa-tRNA-synt_IIb
InterPro:aa-tRNA-synth_IISEG:segInterPro:tRNA_SAD:::
Description
THRRSThreonine--tRNA ligase, mitochondrial 1 [Source:UniProtKB/Swiss-Prot;Acc:O04630]
Coordinates
chr5:+:9437187..9441822
Molecular Weight (calculated)
80940.7 Da
IEP (calculated)
6.968
GRAVY (calculated)
-0.406
Length
709 amino acids
Sequence
(BLAST)
001: MLLRLTARSI RRFTTSSSSL PLLSSSSFCT VPTMAANHPK DEAYLSAVIP KRIKLFEQIQ ANQLENLKSL PHDPIKVTLP DGNVKEGKKW ETTPMDIAAQ
101: ISKGLANSAL ISAVDDVLWD MNRPLEGDCK LELFKFDSDK GRDTLWHSSA HILGQALEQE YGCQLCIGPC TTRGEGFYYD GFYGELGLSD NHFPSIEAGA
201: AKAAKEAQPF ERIEVTKDQA LEMFSENNFK VELINGLPAD MTITVYRCGP LVDLCRGPHI PNTSFVKAFK CLRASSAYWK GDKDRESLQR VYGISYPDQK
301: QLKKYLQFLE EAKKYDHRLL GQKQELFFSH QLSPGSYFFL PLGTRVYNRL MDFIKNQYWH RGYTEVITPN MYNMELWQTS GHADNYKDNM FTFNIEKQEF
401: GLKPMNCPGH CLIFQHRVRS YRELPMRLAD FGVLHRNEAS GALSGLTRVR RFQQDDAHIF CTTEQVKGEV QGVLEFIDYV YKVFGFTYEL KLSTRPEKYL
501: GDLETWDKAE ADLKEAIEAF GKPLVLNEGD GAFYGPKIDI TVSDAMNRKF QCATLQLDFQ LPIRFNLEYA AEDEAKKSRP VMIHRAVLGS VERMFAILLE
601: HYKGKWPFWI SPRQAIVCPI SEKSQQYAEK VQKQIKDAGF YVDADLTDRK IDKKVREAQL AQYNYILVVG ETEAATGQVS VRVRDNAAHS VKSIEDLLEE
701: FKAKTAEFV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.