Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
20363867
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g005800.2.1 | Tomato | plastid | 90.38 | 84.28 |
| PGSC0003DMT400097200 | Potato | cytosol, mitochondrion | 48.08 | 78.69 |
| HORVU1Hr1G057910.4 | Barley | cytosol | 42.01 | 71.36 |
| TraesCS3B01G080400.1 | Wheat | golgi, unclear | 73.37 | 70.25 |
| TraesCS3A01G067300.1 | Wheat | mitochondrion | 73.52 | 70.2 |
| TraesCS3D01G066900.1 | Wheat | mitochondrion | 73.37 | 70.06 |
| Zm00001d027762_P001 | Maize | cytosol | 22.49 | 69.72 |
| TraesCS1B01G248400.1 | Wheat | cytosol | 60.65 | 69.49 |
| HORVU3Hr1G012410.6 | Barley | mitochondrion | 73.96 | 68.87 |
| TraesCS1A01G235200.1 | Wheat | cytosol | 68.93 | 67.93 |
| Zm00001d032667_P005 | Maize | mitochondrion | 73.82 | 67.71 |
| Os08t0295300-01 | Rice | golgi, plasma membrane | 74.56 | 67.65 |
| EER91117 | Sorghum | mitochondrion | 73.67 | 67.39 |
| TraesCS1D01G236900.1 | Wheat | cytosol, mitochondrion | 60.21 | 66.83 |
| Zm00001d013607_P003 | Maize | mitochondrion | 72.78 | 60.15 |
| GSMUA_Achr1P18790_001 | Banana | cytosol | 18.79 | 46.52 |
| Solyc07g064750.1.1 | Tomato | cytosol | 15.38 | 42.8 |
| Solyc07g048080.2.1 | Tomato | nucleus | 35.65 | 35.81 |
Protein Annotations
Description
No Description!
Coordinates
chr8:+:58646388..58660514
Molecular Weight (calculated)
77879.1 Da
IEP (calculated)
7.366
GRAVY (calculated)
-0.429
Length
676 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTAYPRDEN YLEIVVPRRI ALFVSIQNQQ RLQRLSLSPD PIKIELPNGT VKEGKKWNTT PLDIAKEISK SLGSNALIAK VNGVLWDLLR PLESDCKLEL
101: FTFDSDEGRD TFWHSSAHIL GESLERKYGC KLCIGPCTTR GEGFYYDAFY GDLGLNEDHF KGIEAEAAKA VSEKQPFERI EVSRQQALDM FSENRFKVEI
201: IRDLPEDKTI TVYRCGLLVD LCRGPHIPNT SFVKALACTK ASSAYWRGDK DRESLQRVYG ISYPDKKQLK EYLAMLEEAK KYDHRELTKK QELFFFHPLS
301: PGSCFFLPHG ARVCNKLLEF IRSQYWKRGY EEVWSPNMYN MQLWETSGHA ANYKENMFVF EIEKQEFGLK PMNCPGHCLI FDHRVRSYRE LPLRLADFGV
401: LHRNEASGAL TGLTRVRRFQ QDDAHIFCRE SQIKDEVKGV LEFISYVYKI FGFTFDLKLS TRPEKFLGDI ATWVKAEAAL SEALNEHGKP WEINEGDGAF
501: YGPKIDISVS DAMKRKFQCA TLQLDFQLPQ RFNLSYSAED ESKRERPVMI HRAILGSVER MFAILLEHFK GKWPFWLSPR QAMVCPVSDK SQSYALKLRE
601: QIHDAGYYVD VDTSDRTIQK KVREAQVAQY NYILVVGEAE ASSGQVSVRV RDKPDHQVMT VDVLLAQFKD MVASFQ
101: FTFDSDEGRD TFWHSSAHIL GESLERKYGC KLCIGPCTTR GEGFYYDAFY GDLGLNEDHF KGIEAEAAKA VSEKQPFERI EVSRQQALDM FSENRFKVEI
201: IRDLPEDKTI TVYRCGLLVD LCRGPHIPNT SFVKALACTK ASSAYWRGDK DRESLQRVYG ISYPDKKQLK EYLAMLEEAK KYDHRELTKK QELFFFHPLS
301: PGSCFFLPHG ARVCNKLLEF IRSQYWKRGY EEVWSPNMYN MQLWETSGHA ANYKENMFVF EIEKQEFGLK PMNCPGHCLI FDHRVRSYRE LPLRLADFGV
401: LHRNEASGAL TGLTRVRRFQ QDDAHIFCRE SQIKDEVKGV LEFISYVYKI FGFTFDLKLS TRPEKFLGDI ATWVKAEAAL SEALNEHGKP WEINEGDGAF
501: YGPKIDISVS DAMKRKFQCA TLQLDFQLPQ RFNLSYSAED ESKRERPVMI HRAILGSVER MFAILLEHFK GKWPFWLSPR QAMVCPVSDK SQSYALKLRE
601: QIHDAGYYVD VDTSDRTIQK KVREAQVAQY NYILVVGEAE ASSGQVSVRV RDKPDHQVMT VDVLLAQFKD MVASFQ
001: MLLRLTARSI RRFTTSSSSL PLLSSSSFCT VPTMAANHPK DEAYLSAVIP KRIKLFEQIQ ANQLENLKSL PHDPIKVTLP DGNVKEGKKW ETTPMDIAAQ
101: ISKGLANSAL ISAVDDVLWD MNRPLEGDCK LELFKFDSDK GRDTLWHSSA HILGQALEQE YGCQLCIGPC TTRGEGFYYD GFYGELGLSD NHFPSIEAGA
201: AKAAKEAQPF ERIEVTKDQA LEMFSENNFK VELINGLPAD MTITVYRCGP LVDLCRGPHI PNTSFVKAFK CLRASSAYWK GDKDRESLQR VYGISYPDQK
301: QLKKYLQFLE EAKKYDHRLL GQKQELFFSH QLSPGSYFFL PLGTRVYNRL MDFIKNQYWH RGYTEVITPN MYNMELWQTS GHADNYKDNM FTFNIEKQEF
401: GLKPMNCPGH CLIFQHRVRS YRELPMRLAD FGVLHRNEAS GALSGLTRVR RFQQDDAHIF CTTEQVKGEV QGVLEFIDYV YKVFGFTYEL KLSTRPEKYL
501: GDLETWDKAE ADLKEAIEAF GKPLVLNEGD GAFYGPKIDI TVSDAMNRKF QCATLQLDFQ LPIRFNLEYA AEDEAKKSRP VMIHRAVLGS VERMFAILLE
601: HYKGKWPFWI SPRQAIVCPI SEKSQQYAEK VQKQIKDAGF YVDADLTDRK IDKKVREAQL AQYNYILVVG ETEAATGQVS VRVRDNAAHS VKSIEDLLEE
701: FKAKTAEFV
101: ISKGLANSAL ISAVDDVLWD MNRPLEGDCK LELFKFDSDK GRDTLWHSSA HILGQALEQE YGCQLCIGPC TTRGEGFYYD GFYGELGLSD NHFPSIEAGA
201: AKAAKEAQPF ERIEVTKDQA LEMFSENNFK VELINGLPAD MTITVYRCGP LVDLCRGPHI PNTSFVKAFK CLRASSAYWK GDKDRESLQR VYGISYPDQK
301: QLKKYLQFLE EAKKYDHRLL GQKQELFFSH QLSPGSYFFL PLGTRVYNRL MDFIKNQYWH RGYTEVITPN MYNMELWQTS GHADNYKDNM FTFNIEKQEF
401: GLKPMNCPGH CLIFQHRVRS YRELPMRLAD FGVLHRNEAS GALSGLTRVR RFQQDDAHIF CTTEQVKGEV QGVLEFIDYV YKVFGFTYEL KLSTRPEKYL
501: GDLETWDKAE ADLKEAIEAF GKPLVLNEGD GAFYGPKIDI TVSDAMNRKF QCATLQLDFQ LPIRFNLEYA AEDEAKKSRP VMIHRAVLGS VERMFAILLE
601: HYKGKWPFWI SPRQAIVCPI SEKSQQYAEK VQKQIKDAGF YVDADLTDRK IDKKVREAQL AQYNYILVVG ETEAATGQVS VRVRDNAAHS VKSIEDLLEE
701: FKAKTAEFV
Arabidopsis Description
THRRSThreonine--tRNA ligase, mitochondrial 1 [Source:UniProtKB/Swiss-Prot;Acc:O04630]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.