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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 1
  • cytosol 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH36355 Soybean mitochondrion, nucleus 44.85 48.07
PGSC0003DMT400036518 Potato mitochondrion 70.1 47.55
VIT_05s0062g01170.t01 Wine grape nucleus 72.68 22.63
Solyc09g098230.2.1 Tomato nucleus 68.04 21.15
TraesCS5D01G062500.2 Wheat nucleus 67.53 20.93
TraesCS5B01G057400.1 Wheat nucleus 67.53 20.93
TraesCS5A01G051500.1 Wheat nucleus 67.53 20.93
HORVU5Hr1G012090.2 Barley nucleus 67.53 20.86
Os07t0184900-01 Rice nucleus 67.01 20.83
EER95967 Sorghum nucleus 67.01 20.7
EER97823 Sorghum nucleus 66.49 20.54
KRG93118 Soybean nucleus 64.95 19.87
Bra026012.1-P Field mustard nucleus 57.22 19.24
Zm00001d007807_P006 Maize nucleus 65.98 18.93
AT1G16970.1 Thale cress nucleus 58.76 18.36
CDY40008 Canola nucleus 53.61 16.99
CDY35134 Canola nucleus 52.58 16.8
GSMUA_Achr4P17800_001 Banana nucleus 3.09 1.35
Protein Annotations
Gene3D:1.10.1600.10Gene3D:1.10.720.30MapMan:14.4.1.1GO:GO:0000723GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003684GO:GO:0003824GO:GO:0004003GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006259GO:GO:0006303
GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0016787
GO:GO:0032508GO:GO:0042162GO:GO:0043564EnsemblPlantsGene:GSMUA_Achr4G17790_001EnsemblPlants:GSMUA_Achr4P17790_001EnsemblPlants:GSMUA_Achr4T17790_001
InterPro:IPR003034InterPro:IPR016194InterPro:IPR036361InterPro:Ku70InterPro:Ku_CUniProt:M0SPU2
PFAM:PF02037PFAM:PF03730PFscan:PS50800PANTHER:PTHR12604PANTHER:PTHR12604:SF2InterPro:SAP_dom
InterPro:SAP_dom_sfSMART:SM00513InterPro:SPOC-like_C_dom_sfSUPFAM:SSF100939SUPFAM:SSF68906UniParc:UPI000295BB04
Description
ATP-dependent DNA helicase 2 subunit KU70 [Source:GMGC_GENE;Acc:GSMUA_Achr4G17790_001]
Coordinates
chr4:-:18032993..18036171
Molecular Weight (calculated)
22109.1 Da
IEP (calculated)
5.046
GRAVY (calculated)
-0.626
Length
194 amino acids
Sequence
(BLAST)
001: MIYLPYSDDI RHVEEACRLH RTDDAIAPRA TDDQIKKASA LMRRIDLKDF SVCQFANPAL QRHYGILQAL ALDEDEMPDI KDETLPDEEG LARPGVVRVL
101: EEFKIAVYGE NHDQEEADSM SMRGSRSEAS RKRKEMAETA ERESSRYNWA DLAESGQLKD LTVIELKYYL TAHNLSVTGK KEALISRILT HLGK
Best Arabidopsis Sequence Match ( AT1G16970.1 )
(BLAST)
001: MELDPDDVFR DEDEDPENDF FQEKEASKEF VVYLIDASPK MFCSTCPSEE EDKQESHFHI AVSCIAQSLK AHIINRSNDE IAICFFNTRE KKNLQDLNGV
101: YVFNVPERDS IDRPTARLIK EFDLIEESFD KEIGSQTGIV SDSRENSLYS ALWVAQALLR KGSLKTADKR MFLFTNEDDP FGSMRISVKE DMTRTTLQRA
201: KDAQDLGISI ELLPLSQPDK QFNITLFYKD LIGLNSDELT EFMPSVGQKL EDMKDQLKKR VLAKRIAKRI TFVICDGLSI ELNGYALLRP AIPGSITWLD
301: STTNLPVKVE RSYICTDTGA IMQDPIQRIQ PYKNQNIMFT VEELSQVKRI STGHLRLLGF KPLSCLKDYH NLKPSTFLYP SDKEVIGSTR AFIALHRSMI
401: QLERFAVAFY GGTTPPRLVA LVAQDEIESD GGQVEPPGIN MIYLPYANDI RDIDELHSKP GVAAPRASDD QLKKASALMR RLELKDFSVC QFANPALQRH
501: YAILQAIALD ENELRETRDE TLPDEEGMNR PAVVKAIEQF KQSIYGDDPD EESDSGAKEK SKKRKAGDAD DGKYDYIELA KTGKLKDLTV VELKTYLTAN
601: NLLVSGKKEV LINRILTHIG K
Arabidopsis Description
KU70KU70 [Source:UniProtKB/TrEMBL;Acc:A0A178WAS1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.