Factsheet for Os08t0377200-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0376700-01	Rice	cytosol	95.04	95.04
EER99112	Sorghum	cytosol	67.77	66.67
Os08t0358800-01	Rice	cytosol	72.73	65.19
EES14894	Sorghum	cytosol	64.46	63.41
Zm00001d032381_P001	Maize	cytosol	64.46	63.41
Zm00001d050200_P001	Maize	extracellular	57.02	55.65
OQU80317	Sorghum	cytosol	60.33	51.77
Os04t0524300-01	Rice	cytosol, mitochondrion, nucleus, plastid	48.76	44.03
Os02t0631700-01	Rice	plastid	48.76	40.14
Os04t0673300-01	Rice	plastid	49.59	35.29
Os12t0139400-01	Rice	nucleus	48.76	29.35
Os11t0143300-02	Rice	cytosol	48.76	28.37
Os07t0449700-01	Rice	cytosol, nucleus, plastid	45.45	26.7
Os01t0952500-01	Rice	cytosol	47.11	24.57
Os04t0442300-01	Rice	cytosol	42.15	22.08
Os02t0557800-01	Rice	cytosol, golgi, nucleus	44.63	21.43

Protein Annotations

EntrezGene:107275331	EntrezGene:107275387	MapMan:11.4.2.5	Gene3D:3.40.50.2300	EMBL:AB249663	EMBL:AB249664
EMBL:AP008214	ProteinID:BAC45098.1	ProteinID:BAC45103.1	ProteinID:BAD05296.1	ProteinID:BAT05199.1	ProteinID:BAT05204.1
InterPro:CheY-like_superfamily	ProteinID:EAZ42557.1	ProteinID:FAA00269.1	ProteinID:FAA00271.1	GO:GO:0000160	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009735
GO:GO:0009736	GO:GO:0009987	InterPro:IPR001789	EnsemblPlantsGene:Os08g0377200	EnsemblPlants:Os08t0377200-01	PFAM:PF00072
PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF33	UniProt:Q2HWG1	SMART:SM00448	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI00006965A0	RefSeq:XP_015649686.1	RefSeq:XP_015649695.1	:	:

Description

A-TYPE RESPONSE REGULATOR 12A-type response regulator, Cytokinin signaling (Os08t0377200-01)

Coordinates

chr8:+:17714143..17714938

Molecular Weight (calculated)

13633.9 Da

IEP (calculated)

6.341

GRAVY (calculated)

0.180

Length

121 amino acids

Sequence
(BLAST)

001: MSSPHVLVVD DTLVDRHVVS MALMRHNVRV TAVESVMQAL MFLDSEHDVN MIVSDYCMPD MTGYDLLMEV KKSPKLAHLP VVIASSDNIP ERIRKCLDGG
101: AKDYILKPVK IVDLPRILNY I

Best Arabidopsis Sequence Match ( AT1G59940.1 )
(BLAST)

001: MAKDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKAA VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A

Arabidopsis Description

ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.