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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 2
  • cytosol 1
  • nucleus 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d019555_P002 Maize cytosol 55.83 77.7
EER96309 Sorghum cytosol 59.22 72.62
Os04t0524300-01 Rice cytosol, mitochondrion, nucleus, plastid 47.09 72.39
GSMUA_Achr1P17800_001 Banana cytosol 43.69 68.7
Os02t0631700-01 Rice plastid 48.54 68.03
GSMUA_Achr10P... Banana nucleus 45.15 67.88
GSMUA_AchrUn_... Banana nucleus 41.75 62.32
Os04t0673300-01 Rice plastid 43.2 52.35
Os08t0377200-01 Rice cytosol 26.7 45.45
GSMUA_Achr1P07020_001 Banana mitochondrion, plastid 45.63 44.98
Os08t0376700-01 Rice cytosol 26.21 44.63
Os12t0139400-01 Rice nucleus 37.38 38.31
Os11t0143300-02 Rice cytosol 37.38 37.02
Os08t0358800-01 Rice cytosol 21.84 33.33
Os01t0952500-01 Rice cytosol 37.38 33.19
Os04t0442300-01 Rice cytosol 30.58 27.27
Os02t0557800-01 Rice cytosol, golgi, nucleus 30.58 25.0
Protein Annotations
MapMan:11.4.2.5Gene3D:3.40.50.2300EMBL:AB249657ProteinID:BAC15873.1ProteinID:BAT01309.1InterPro:CheY-like_superfamily
ProteinID:FAA00268.1GO:GO:0000160GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009719GO:GO:0009735GO:GO:0009736GO:GO:0009987InterPro:IPR001789
EnsemblPlantsGene:Os07g0449700EnsemblPlants:Os07t0449700-01PFAM:PF00072PFscan:PS50110PANTHER:PTHR43874PANTHER:PTHR43874:SF18
SMART:SM00448SUPFAM:SSF52172InterPro:Sig_transdc_resp-reg_receiverUniParc:UPI00000AD56BSEG:seg:
Description
A-TYPE RESPONSE REGULATOR 7A-type response regulator, Cytokinin signaling (Os07t0449700-01)
Coordinates
chr7:+:15440889..15442180
Molecular Weight (calculated)
22651.3 Da
IEP (calculated)
3.990
GRAVY (calculated)
-0.606
Length
206 amino acids
Sequence
(BLAST)
001: MRVPAAVTGG CGCGVDGGGG CCRGGGKLAD WEEGKDDEMK SVVVKGWTRM AQVVPLHDNA SAEDDDDDEE DDDEDDDDDD DEDDEEEAAP PYVMAVDDSS
101: VDRAVITALL RRSKYRDSGK RALEILGSEP NVSMIITDYW MPEMTGYDLL KKIKESSELK QIPVVIMSSE NVPTRISRCL EEGAEDFLLK PVRPADISRI
201: TSRMLQ
Best Arabidopsis Sequence Match ( AT3G57040.1 )
(BLAST)
001: MGMAAESQFH VLAVDDSLFD RKLIERLLQK SSCQVTTVDS GSKALEFLGL RQSTDSNDPN AFSKAPVNHQ VVEVNLIITD YCMPGMTGYD LLKKVKESSA
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
Arabidopsis Description
ARR9Two-component response regulator ARR9 [Source:UniProtKB/Swiss-Prot;Acc:O80366]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.