Factsheet for Os04t0673300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2
cytosol 1
nucleus 1
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P17800_001	Banana	cytosol	62.35	80.92
GSMUA_Achr10P...	Banana	nucleus	64.71	80.29
Zm00001d026594_P001	Maize	cytosol	73.53	78.62
GSMUA_AchrUn_...	Banana	nucleus	62.94	77.54
EES11637	Sorghum	plastid	76.47	76.47
Zm00001d001865_P001	Maize	plastid	69.41	75.64
TraesCS2B01G582300.1	Wheat	cytosol	75.88	75.0
HORVU2Hr1G120490.2	Barley	plastid	75.88	74.57
TraesCS2D01G552200.1	Wheat	plastid	77.06	74.43
TraesCS2A01G551100.1	Wheat	plastid	77.06	74.43
Os04t0524300-01	Rice	cytosol, mitochondrion, nucleus, plastid	57.65	73.13
Os02t0631700-01	Rice	plastid	61.18	70.75
GSMUA_Achr1P07020_001	Banana	mitochondrion, plastid	68.24	55.5
Os08t0376700-01	Rice	cytosol	35.29	49.59
Os08t0377200-01	Rice	cytosol	35.29	49.59
Os07t0449700-01	Rice	cytosol, nucleus, plastid	52.35	43.2
Os12t0139400-01	Rice	nucleus	44.12	37.31
Os11t0143300-02	Rice	cytosol	44.12	36.06
Os08t0358800-01	Rice	cytosol	28.24	35.56
Os01t0952500-01	Rice	cytosol	47.06	34.48
Os04t0442300-01	Rice	cytosol	38.82	28.57
Os02t0557800-01	Rice	cytosol, golgi, nucleus	35.88	24.21

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	EntrezGene:4337372	EMBL:AB249653	EMBL:AK059734	ProteinID:BAF16145.1
ProteinID:BAS91589.1	ProteinID:CAE03227.1	ProteinID:CAJ14992.1	InterPro:CheY-like_superfamily	ProteinID:EAZ32382.1	ProteinID:FAA00267.1
GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009719	GO:GO:0009736	GO:GO:0009987	InterPro:IPR001789	EnsemblPlantsGene:Os04g0673300	EnsemblPlants:Os04t0673300-01
PFAM:PF00072	PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF38	UniProt:Q7XQA6	SMART:SM00448
SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI00001B14CC	RefSeq:XP_015634156.1	SEG:seg	:

Description

A-TYPE RESPONSE REGULATOR 6A-type response regulator, Cytokinin signaling (Os04t0673300-01)

Coordinates

chr4:+:34375978..34377092

Molecular Weight (calculated)

18004.9 Da

IEP (calculated)

8.482

GRAVY (calculated)

0.098

Length

170 amino acids

Sequence
(BLAST)

001: MAAAAQAPAA AKVVVATSPR AGGGGGGGGD RKVVPVVVAA AAGDEAQSEM HVLAVDDSSV DRAVIAKILR SSKYRVTTVE SATRALELLC LGLVPNVNMI
101: ITDYWMPGMT GYELLKRVKE SSQLKEIPVV IMSSENVPNR ISRCLEEGAE DFLLKPVRPS DVSRLCSRIR

Best Arabidopsis Sequence Match ( AT3G57040.1 )
(BLAST)

001: MGMAAESQFH VLAVDDSLFD RKLIERLLQK SSCQVTTVDS GSKALEFLGL RQSTDSNDPN AFSKAPVNHQ VVEVNLIITD YCMPGMTGYD LLKKVKESSA
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV

Arabidopsis Description

ARR9Two-component response regulator ARR9 [Source:UniProtKB/Swiss-Prot;Acc:O80366]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.