CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01073
EES02247
OQU78515

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G80300.1	EES01073	AT2G42580.1	19000166
AT1G80300.1	EES02247	AT2G42580.1	19000166
AT1G80300.1	OQU78515	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011471_P001	Maize	plastid	92.3	92.59
Zm00001d044060_P001	Maize	extracellular, plasma membrane	90.88	88.92
Os01t0647100-01	Rice	plastid	85.69	84.89
TraesCS3A01G233300.1	Wheat	plastid	78.46	80.23
TraesCS3B01G262600.1	Wheat	plastid	78.14	79.9
HORVU3Hr1G058170.1	Barley	plastid	78.77	79.27
GSMUA_Achr7P08430_001	Banana	plastid	65.25	73.32
TraesCS3D01G219900.1	Wheat	golgi, unclear	77.2	73.28
GSMUA_Achr2P16990_001	Banana	plastid	66.67	69.97
KXG29763	Sorghum	plastid	70.75	69.77
GSMUA_Achr10P...	Banana	mitochondrion	66.35	69.52
VIT_09s0002g05710.t01	Wine grape	plastid	67.45	69.08
Solyc03g119970.2.1	Tomato	plastid	66.82	68.0
CDX87299	Canola	mitochondrion, plastid	65.57	67.92
PGSC0003DMT400014304	Potato	plastid	66.82	67.89
CDX79394	Canola	plastid	65.72	67.86
Bra035190.1-P	Field mustard	mitochondrion, plastid	65.41	67.75
KRH09791	Soybean	extracellular	65.72	67.75
KRH47502	Soybean	mitochondrion	66.35	67.74
Bra016656.1-P	Field mustard	plastid	64.94	67.7
CDY57697	Canola	plastid	65.57	67.69
Bra003560.1-P	Field mustard	plastid	65.57	67.69
CDX83974	Canola	plastid	64.78	67.65
CDX96838	Canola	plastid	65.09	67.65
CDY39988	Canola	mitochondrion, plastid	65.41	67.64
KRH23529	Soybean	endoplasmic reticulum	65.41	67.64
KRH44405	Soybean	endoplasmic reticulum	66.04	67.31
Bra026126.1-P	Field mustard	plastid	63.99	66.83
CDY36568	Canola	mitochondrion	63.99	66.72
Solyc12g042950.1.1	Tomato	mitochondrion, plastid	65.72	66.45
CDY39658	Canola	mitochondrion	64.15	66.45
PGSC0003DMT400073724	Potato	mitochondrion, plastid	65.88	66.4
AT1G15500.1	Thale cress	mitochondrion	64.47	66.34
AT1G80300.1	Thale cress	plastid	64.94	66.19
Solyc08g066920.1.1	Tomato	cytosol	12.26	39.59

Protein Annotations

MapMan:24.2.2.14	EntrezGene:8058234	InterPro:ADP_ATP_car	UniProt:C5XF62	EnsemblPlants:EES03353	ProteinID:EES03353
ProteinID:EES03353.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005215	GO:GO:0005471	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0006862	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0015866	GO:GO:0015867
GO:GO:0016020	GO:GO:0016021	GO:GO:0031969	InterPro:MFS_trans_sf	PFAM:PF03219	PANTHER:PTHR31187
PANTHER:PTHR31187:SF3	EnsemblPlantsGene:SORBI_3003G237400	SUPFAM:SSF103473	unigene:Sbi.20596	TIGRFAMs:TIGR00769	TMHMM:TMhelix
UniParc:UPI0001A850F7	RefSeq:XP_002458233.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:57671841..57676529

Molecular Weight (calculated)

68806.2 Da

IEP (calculated)

10.217

GRAVY (calculated)

0.370

Length

636 amino acids

Sequence
(BLAST)

001: MESRALLHAR PAALPPRAGL RLPLPLPRPR AVSLTPAAKP AALQSPLLAS RGPFLPRHDA VLGNGFLKRR AASAGGDVSF RAQAAAAVPA PAPQPEESST
101: KFLGIDVKTL KKIVPLGLMF FCILFNYTIL RDTKDVLVVT AKGSSAEIIP FLKTWVNLPM AIGFMLLYTK LSNVLSREAL FYTVIFPFIA FFGAFAFVLY
201: PLRDVIHPTA LADKLLAALG PSFLGPVAIL RIWSFCLFYV MAELWGSVVI SVLFWGFANQ ITTVDEAKEF YPLFGLGANI ALIFSGRTVK YFSNLRKTLG
301: PGIDGWEVSL KGMMSIVVLL GLVITSIYWG VNKFVLNDPS LPKSDRKKKK EKPKLGMKES LKVLLSSRYV RDLATLVVAY GISINLVEVT WKSKLKAQFP
401: SPNEYSSFMG DFSTATGIAT FTMMLLGRYI LRKFGWGVAA MITPTVLLLT GAGFFSLILF GQPLTPMLAT MGMTPLLAAV YVGAMQNIFS KSAKYSLFDP
501: CKEMAYIPLD EDMKVKGKAA IDVVCNPLGK SGGALIQQFM ILTFGSLANS TPYLGGILLV IVLAWLGAAN SLDKQFSALA KEDLKKEKAA QEKVEPSLLK
601: APAEGTGDVP VEQTNGSVTS QATGTESSPS NSSPIQ

Best Arabidopsis Sequence Match ( AT1G15500.1 )
(BLAST)

001: MEGLIQTRGI LSLPAKPIGV RRLLQPSHGL KQRLFTTNLP ALSLSSNGHK KFQAFQQIPL GISVSHKERS RGFICKAEAA AAGGGNVFDE GDTAAMAVSP
101: KIFGVEVTTL KKIVPLGLMF FCILFNYTIL RDTKDVLVVT AKGSSAEIIP FLKTWVNLPM AIGFMLLYTK LSNVLSKKAL FYTVIVPFIV YFGAFGFVMY
201: PLSNLIHPEA LADKLLATLG PRFMGPLAIM RIWSFCLFYV MAELWGSVVV SVLFWGFANQ ITTVDEAKKF YPLFGLGANV ALIFSGRTVK YFSNMRKNLG
301: PGVDGWAVSL KAMMSIVVGM GLAICFLYWW VNRYVPLPTR SKKKKVKPQM GTMESLKFLV SSPYIRDLAT LVVAYGISIN LVEVTWKSKL KAQFPSPNEY
401: SAFMGDFSTC TGIATFTMML LSQYVFKKYG WGVAAKITPT VLLLTGVAFF SLILFGGPFA PLVAKLGMTP LLAAVYVGAL QNIFSKSAKY SLFDPCKEMA
501: YIPLDEDTKV KGKAAIDVVC NPLGKSGGAL IQQFMILTFG SLANSTPYLG VILLGIVTAW LAAAKSLEGQ FNTLMSEEEL EREMERASSV KIPVVSQEDA
601: PSGETTSQLS EKSTPTGI

Arabidopsis Description

AATP2ADP,ATP carrier protein [Source:UniProtKB/TrEMBL;Acc:A0A178WDN7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.