Factsheet for Os01t0647100-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
plasma membrane 1

Predictors

GFP

MS/MS

Papers

plastid: 21433289

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0218200-00
Os05t0210600-01
Os05t0587300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G80300.1	Os01t0218200-00	AT2G42580.1	19000166
AT1G80300.1	Os05t0210600-01	AT2G42580.1	19000166
AT1G80300.1	Os05t0587300-01	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03353	Sorghum	plastid	84.89	85.69
Zm00001d011471_P001	Maize	plastid	84.11	85.17
Zm00001d044060_P001	Maize	extracellular, plasma membrane	83.02	82.0
TraesCS3B01G262600.1	Wheat	plastid	77.88	80.39
HORVU3Hr1G058170.1	Barley	plastid	78.97	80.22
TraesCS3A01G233300.1	Wheat	plastid	77.57	80.06
TraesCS3D01G219900.1	Wheat	golgi, unclear	78.04	74.78
GSMUA_Achr7P08430_001	Banana	plastid	64.8	73.5
Os02t0208100-01	Rice	plastid	70.41	71.75
GSMUA_Achr2P16990_001	Banana	plastid	66.51	70.46
GSMUA_Achr10P...	Banana	mitochondrion	66.2	70.02
CDX83974	Canola	plastid	65.73	69.29
CDX96838	Canola	plastid	66.04	69.28
Bra016656.1-P	Field mustard	plastid	65.73	69.18
VIT_09s0002g05710.t01	Wine grape	plastid	66.67	68.92
Bra026126.1-P	Field mustard	plastid	65.26	68.8
Bra035190.1-P	Field mustard	mitochondrion, plastid	65.73	68.73
CDX87299	Canola	mitochondrion, plastid	65.73	68.73
CDY36568	Canola	mitochondrion	65.26	68.69
CDY39988	Canola	mitochondrion, plastid	65.73	68.62
KRH47502	Soybean	mitochondrion	66.51	68.54
CDX79394	Canola	plastid	65.73	68.51
Bra003560.1-P	Field mustard	plastid	65.58	68.34
CDY57697	Canola	plastid	65.58	68.34
AT1G15500.1	Thale cress	mitochondrion	65.73	68.28
Solyc03g119970.2.1	Tomato	plastid	66.36	68.16
PGSC0003DMT400014304	Potato	plastid	66.36	68.05
CDY39658	Canola	mitochondrion	64.95	67.92
KRH09791	Soybean	extracellular	65.26	67.91
KRH44405	Soybean	endoplasmic reticulum	65.89	67.79
AT1G80300.1	Thale cress	plastid	65.73	67.63
KRH23529	Soybean	endoplasmic reticulum	64.49	67.32
Solyc12g042950.1.1	Tomato	mitochondrion, plastid	65.58	66.93
PGSC0003DMT400073724	Potato	mitochondrion, plastid	65.73	66.88
Solyc08g066920.1.1	Tomato	cytosol	12.77	41.62

Protein Annotations

MapMan:24.2.2.14	EntrezGene:4325928	InterPro:ADP_ATP_car	ProteinID:BAD68020.1	ProteinID:BAD68186.1	ProteinID:BAF05624.1
ProteinID:BAS73413.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005215	GO:GO:0005471	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0006862	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0015866	GO:GO:0015867
GO:GO:0016020	GO:GO:0016021	GO:GO:0031969	InterPro:MFS_trans_sf	EnsemblPlantsGene:Os01g0647100	EnsemblPlants:Os01t0647100-01
PFAM:PF03219	PANTHER:PTHR31187	PANTHER:PTHR31187:SF3	UniProt:Q5VQU1	SUPFAM:SSF103473	TIGRFAMs:TIGR00769
TMHMM:TMhelix	UniParc:UPI0000457D33	RefSeq:XP_015611412.1	SEG:seg	:	:

Description

PLASTIDIC NUCLEOTIDE TRANSPORT PROTEIN 1ADP/ATP carrier protein family protein. (Os01t0647100-01)

Coordinates

chr1:-:26078129..26082198

Molecular Weight (calculated)

68737.2 Da

IEP (calculated)

10.169

GRAVY (calculated)

0.425

Length

642 amino acids

Sequence
(BLAST)

001: MESLALLHAK PGGLPPRAGL RLPLPRARSA RVSLPSSPAA PVSLQSPLLL ASRSGPTSRD AVVGLGLGCG LLRRRSGASG GGGGGVSCGA QPAAAAAAGA
101: VPAAQPEGKK FLGVEVKTLK KIVPLGLMFF CILFNYTILR DTKDVLVVTA KGSSAEIIPF LKTWVNLPMA IGFMLLYTKL SNVLSREALF YTVIFPFIAF
201: FGAFAFVLYP LRNVIHPTAL ADKLLAALGP SFLGPVAILR IWSFCLFYVM AELWGSVVIS VLFWGFANQI TTVEEAKEFY PLFGLGANIA LIFSGRTVKY
301: FSNLRKTLGP GIDGWEVSLK GMMSLVVLLG LVITSIYWGV NKFVLNDPSL PKSDRKKKKD KPKLGMKESL KVLLSSRYVR DLATLVVAYG ISINLVEVTW
401: KSKLKAQFPS PNEYSSFMGD FSTATGIATF TMMLLGRIIL RKFGWGVAAM ITPTVLLLTG VGFFSLILFG QPLTPMLATM GMTPLLAAVY VGALQNIFSK
501: SAKYSLFDPC KEMAYIPLDE DMKVKGKAAI DVVCNPLGKS GGALIQQFMI LTFGSLANST PYLGGILLVI VLAWLGAASS LDKQFSSLAK EDLKRDMSAK
601: EKVDPSLLKA PEADVLVEHT NGTIESEATA TESSPSNSSP SN

Best Arabidopsis Sequence Match ( AT1G80300.1 )
(BLAST)

001: MEAVIQTRGL LSLPTKPIGV RSQLQPSHGL KQRLFAAKPR NLHGLSLSFN GHKKFQTFEP TLHGISISHK ERSTEFICKA EAAAAGDGAV FGEGDSAAVV
101: ASPKIFGVEV ATLKKIIPLG LMFFCILFNY TILRDTKDVL VVTAKGSSAE IIPFLKTWVN LPMAIGFMLL YTKLSNVLSK KALFYTVIVP FIIYFGAFGF
201: VMYPLSNYIH PEALADKLLT TLGPRFMGPI AILRIWSFCL FYVMAELWGS VVVSVLFWGF ANQITTVDEA KKFYPLFGLG ANVALIFSGR TVKYFSNLRK
301: NLGPGVDGWA VSLKAMMSIV VGMGLAICLL YWWVNRYVPL PTRSKNKKEK PKMGTMESLK FLVSSPYIRD LATLVVAYGI SINLVEVTWK SKLKAQFPSP
401: NEYSAFMGDF STCTGVATFT MMLLSQYVFN KYGWGVAAKI TPTVLLLTGV AFFSLILFGG PFAPLVAKLG MTPLLAAVYV GALQNIFSKS AKYSLFDPCK
501: EMAYIPLDED TKVKGKAAID VVCNPLGKSG GALIQQFMIL SFGSLANSTP YLGMILLVIV TAWLAAAKSL EGQFNSLRSE EELEKEMERA SSVKIPVVSQ
601: DESGNGSLGE SPSSSPEKSA PTNL

Arabidopsis Description

AATP1ADP,ATP carrier protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39002]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.