Factsheet for Solyc12g042950.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073724	Potato	mitochondrion, plastid	97.93	97.62
Solyc03g119970.2.1	Tomato	plastid	87.12	87.68
VIT_09s0002g05710.t01	Wine grape	plastid	82.19	83.25
KRH44405	Soybean	endoplasmic reticulum	80.13	80.77
KRH23529	Soybean	endoplasmic reticulum	78.7	80.49
KRH47502	Soybean	mitochondrion	79.65	80.42
KRH09791	Soybean	extracellular	78.86	80.39
Bra016656.1-P	Field mustard	plastid	75.99	78.36
Bra026126.1-P	Field mustard	plastid	75.68	78.16
CDX83974	Canola	plastid	75.68	78.16
AT1G80300.1	Thale cress	plastid	77.42	78.04
CDY36568	Canola	mitochondrion	75.68	78.03
CDX96838	Canola	plastid	75.83	77.94
CDX79394	Canola	plastid	76.31	77.92
CDY39658	Canola	mitochondrion	75.83	77.69
CDY57697	Canola	plastid	75.99	77.6
Bra003560.1-P	Field mustard	plastid	75.83	77.44
CDY39988	Canola	mitochondrion, plastid	75.68	77.4
AT1G15500.1	Thale cress	mitochondrion	75.99	77.35
CDX87299	Canola	mitochondrion, plastid	75.36	77.2
Bra035190.1-P	Field mustard	mitochondrion, plastid	75.36	77.2
HORVU7Hr1G057290.1	Barley	endoplasmic reticulum, golgi	5.72	76.6
Os02t0208100-01	Rice	plastid	66.93	66.83
GSMUA_Achr7P08430_001	Banana	plastid	60.1	66.78
TraesCS6A01G178000.1	Wheat	golgi	65.34	66.72
TraesCS6D01G166400.1	Wheat	mitochondrion, plastid	65.5	66.56
TraesCS6B01G206800.1	Wheat	golgi	65.5	66.45
TraesCS3A01G233300.1	Wheat	plastid	65.34	66.08
TraesCS3B01G262600.1	Wheat	plastid	65.34	66.08
EES03353	Sorghum	plastid	66.45	65.72
Os01t0647100-01	Rice	plastid	66.93	65.58
GSMUA_Achr10P...	Banana	mitochondrion	62.16	64.42
KXG29763	Sorghum	plastid	65.98	64.34
GSMUA_Achr2P16990_001	Banana	plastid	61.21	63.53
TraesCS3D01G219900.1	Wheat	golgi, unclear	66.14	62.09
Solyc08g066920.1.1	Tomato	cytosol	14.31	45.69
Zm00001d039684_P001	Maize	cytosol	7.95	45.45

Protein Annotations

MapMan:24.2.2.14	InterPro:ADP_ATP_car	GO:GO:0000166	GO:GO:0003674	GO:GO:0005215	GO:GO:0005471
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006862	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0015866
GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0031969	UniProt:K4DF84	InterPro:MFS_trans_sf
PFAM:PF03219	PANTHER:PTHR31187	PANTHER:PTHR31187:SF3	SUPFAM:SSF103473	EnsemblPlantsGene:Solyc12g042950.1	EnsemblPlants:Solyc12g042950.1.1
TIGRFAMs:TIGR00769	TMHMM:TMhelix	UniParc:UPI0002769439	SEG:seg	:	:

Description

ADP,ATP carrier protein [Source:UniProtKB/TrEMBL;Acc:K4DF84]

Coordinates

chr12:-:39415019..39418138

Molecular Weight (calculated)

68794.7 Da

IEP (calculated)

10.040

GRAVY (calculated)

0.316

Length

629 amino acids

Sequence
(BLAST)

001: MEGVLQTRGL LSLPSKPKIK AFYPLPQGGL RNRFNSLSSL KPNPFNGVSL SSNGFQKVQG FDTKPQLFGQ KKRCFSICKA AAAGGAADGQ PLFVEKEQPK
101: FMGIEVVTLK KIIPLGAMFF CILFNYTILR DTKDVLVVTA KGSSAEIIPF LKTWVNLPMA IGFMLLYTKL ANVLSKEALF YTVILPFIAF FGAFGFVLYP
201: LSNYFHPTAF ADKLLNTLGP RFLGPIAILR IWSFCLFYVM AELWGSVVVS VLFWGFANQI TTVDEAKKFY PLFGLGANVA LIFSGRTVKY FSSLRSSLGP
301: GVDGWAISLK GMMSIVVMMG GAICFFYWWV NRNVPLPTRS KKKKVKPNMT TMESLKFLVS SKYIRDLATL VVAYGISINL VEVTWKSKLK AQFPSPNEYS
401: SFMGDFSTAT GIATFTMMLL SQWIFDKYGW GAAAKITPTV LLLTGVGFFS LLLFGAPLAP TLAKFGMTPL LAAVYVGAMQ NIFSKSAKYS LFDPCKEMAY
501: IPLDEDTKVK GKAAIDVVCN PLGKSGGALI QQFMILTFGS LASSTPYLGG VLLVIVLAWL AAAKSLDQQF TQLRHEEDLE KEMERASLKI PVVSQNETGN
601: SPLSSGSSLN PAEGDSTNAS SEPSSPRSL

Best Arabidopsis Sequence Match ( AT1G80300.1 )
(BLAST)

001: MEAVIQTRGL LSLPTKPIGV RSQLQPSHGL KQRLFAAKPR NLHGLSLSFN GHKKFQTFEP TLHGISISHK ERSTEFICKA EAAAAGDGAV FGEGDSAAVV
101: ASPKIFGVEV ATLKKIIPLG LMFFCILFNY TILRDTKDVL VVTAKGSSAE IIPFLKTWVN LPMAIGFMLL YTKLSNVLSK KALFYTVIVP FIIYFGAFGF
201: VMYPLSNYIH PEALADKLLT TLGPRFMGPI AILRIWSFCL FYVMAELWGS VVVSVLFWGF ANQITTVDEA KKFYPLFGLG ANVALIFSGR TVKYFSNLRK
301: NLGPGVDGWA VSLKAMMSIV VGMGLAICLL YWWVNRYVPL PTRSKNKKEK PKMGTMESLK FLVSSPYIRD LATLVVAYGI SINLVEVTWK SKLKAQFPSP
401: NEYSAFMGDF STCTGVATFT MMLLSQYVFN KYGWGVAAKI TPTVLLLTGV AFFSLILFGG PFAPLVAKLG MTPLLAAVYV GALQNIFSKS AKYSLFDPCK
501: EMAYIPLDED TKVKGKAAID VVCNPLGKSG GALIQQFMIL SFGSLANSTP YLGMILLVIV TAWLAAAKSL EGQFNSLRSE EELEKEMERA SSVKIPVVSQ
601: DESGNGSLGE SPSSSPEKSA PTNL

Arabidopsis Description

AATP1ADP,ATP carrier protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39002]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.