CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 3
plastid 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01073
EES02247
OQU78515

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G80300.1	EES01073	AT2G42580.1	19000166
AT1G80300.1	EES02247	AT2G42580.1	19000166
AT1G80300.1	OQU78515	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016411_P001	Maize	plastid	90.7	89.31
Os02t0208100-01	Rice	plastid	86.36	88.41
HORVU6Hr1G036830.1	Barley	plastid	82.79	86.13
TraesCS6B01G206800.1	Wheat	golgi	82.64	85.97
TraesCS6D01G166400.1	Wheat	mitochondrion, plastid	82.17	85.62
TraesCS6A01G178000.1	Wheat	golgi	81.71	85.55
GSMUA_Achr7P08430_001	Banana	plastid	64.65	73.67
EES03353	Sorghum	plastid	69.77	70.75
GSMUA_Achr2P16990_001	Banana	plastid	65.89	70.13
GSMUA_Achr10P...	Banana	mitochondrion	65.12	69.19
PGSC0003DMT400014304	Potato	plastid	66.36	68.37
KRH44405	Soybean	endoplasmic reticulum	66.05	68.27
VIT_09s0002g05710.t01	Wine grape	plastid	65.43	67.95
Solyc03g119970.2.1	Tomato	plastid	65.74	67.84
KRH47502	Soybean	mitochondrion	65.43	67.74
Bra003560.1-P	Field mustard	plastid	64.65	67.69
CDY57697	Canola	plastid	64.65	67.69
CDX79394	Canola	plastid	64.65	67.69
CDX87299	Canola	mitochondrion, plastid	64.34	67.59
Bra035190.1-P	Field mustard	mitochondrion, plastid	64.34	67.59
Bra016656.1-P	Field mustard	plastid	63.57	67.21
Bra026126.1-P	Field mustard	plastid	63.41	67.16
CDY39988	Canola	mitochondrion, plastid	64.03	67.15
CDY39658	Canola	mitochondrion	63.88	67.1
KRH09791	Soybean	extracellular	64.19	67.1
CDY36568	Canola	mitochondrion	63.41	67.05
CDX83974	Canola	plastid	63.26	67.0
CDX96838	Canola	plastid	63.57	66.99
KRH23529	Soybean	endoplasmic reticulum	63.88	66.99
AT1G15500.1	Thale cress	mitochondrion	63.72	66.5
AT1G80300.1	Thale cress	plastid	63.88	66.03
Solyc12g042950.1.1	Tomato	mitochondrion, plastid	64.34	65.98
PGSC0003DMT400073724	Potato	mitochondrion, plastid	64.5	65.93
Solyc08g066920.1.1	Tomato	cytosol	11.47	37.56

Protein Annotations

MapMan:24.2.2.14	UniProt:A0A194YNF4	InterPro:ADP_ATP_car	GO:GO:0000166	GO:GO:0003674	GO:GO:0005215
GO:GO:0005471	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006862	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536
GO:GO:0015866	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0031969	EnsemblPlants:KXG29763
ProteinID:KXG29763	ProteinID:KXG29763.1	PFAM:PF03219	PANTHER:PTHR31187	PANTHER:PTHR31187:SF3	EnsemblPlantsGene:SORBI_3004G087500
TIGRFAMs:TIGR00769	TMHMM:TMhelix	UniParc:UPI0007F2741F	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:7408007..7411418

Molecular Weight (calculated)

69863.1 Da

IEP (calculated)

9.956

GRAVY (calculated)

0.313

Length

645 amino acids

Sequence
(BLAST)

001: MESGLVASHR LRLPSPSASA GHHHHHLLRH RHAHAPAPLR LSLPRHLPGP APLRLPAALP LRPYLPPLRA SASASAAAAP GDDASAASPK FLGVETKTLK
101: KIVPLGLMFF CILFNYTILR DTKDVLVVTA KGSSAEIIPF LKTWVNLPMA VGFMLLYTKL ADVLSKEALF YAVIFPFIAF FGAFAYVLYP MRDAIHPTAL
201: ADRLLASLGP SFLGPVAILR VWSFCLFYVM AELWGSVVIS VLFWGFANQI TTVEEAKEFY PLFGLGANVA LIFSGRTVKY FSNMRKNLGP GVDGWAISLK
301: AMMSIVVVLG LIITGIYWGV NKFVIDNSSM PVVERKKKDK PKLSMGESMK VLLSSRYVRD LATLVVAYGI SINLVEVTWK SKLKAQFPSP NEYSSFMGDF
401: STATGIATFT MMLLGRVILR KFGWGVAATI TPAVLLLTGV GFFSLILFGE PLTPLMTKFG MTPLLAAVYV GAMQNIFSKS AKYSLFDPCK EMAYIPLDED
501: MKVKGKAAID VVCNPLGKSG GALIQQFMIL SFGSLANSTP YLGGILLVIV LAWLGAVRSL DSQFSTLAKQ DLEKEKMLKA QAVEVETTAK VVGTGNGSLQ
601: ETLASEPSAN GAATKQSREP ESTTTEKSGQ EPESTTTEKS GQQSQ

Best Arabidopsis Sequence Match ( AT1G80300.1 )
(BLAST)

001: MEAVIQTRGL LSLPTKPIGV RSQLQPSHGL KQRLFAAKPR NLHGLSLSFN GHKKFQTFEP TLHGISISHK ERSTEFICKA EAAAAGDGAV FGEGDSAAVV
101: ASPKIFGVEV ATLKKIIPLG LMFFCILFNY TILRDTKDVL VVTAKGSSAE IIPFLKTWVN LPMAIGFMLL YTKLSNVLSK KALFYTVIVP FIIYFGAFGF
201: VMYPLSNYIH PEALADKLLT TLGPRFMGPI AILRIWSFCL FYVMAELWGS VVVSVLFWGF ANQITTVDEA KKFYPLFGLG ANVALIFSGR TVKYFSNLRK
301: NLGPGVDGWA VSLKAMMSIV VGMGLAICLL YWWVNRYVPL PTRSKNKKEK PKMGTMESLK FLVSSPYIRD LATLVVAYGI SINLVEVTWK SKLKAQFPSP
401: NEYSAFMGDF STCTGVATFT MMLLSQYVFN KYGWGVAAKI TPTVLLLTGV AFFSLILFGG PFAPLVAKLG MTPLLAAVYV GALQNIFSKS AKYSLFDPCK
501: EMAYIPLDED TKVKGKAAID VVCNPLGKSG GALIQQFMIL SFGSLANSTP YLGMILLVIV TAWLAAAKSL EGQFNSLRSE EELEKEMERA SSVKIPVVSQ
601: DESGNGSLGE SPSSSPEKSA PTNL

Arabidopsis Description

AATP1ADP,ATP carrier protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39002]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.