Factsheet for Zm00001d016411_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 3
plastid 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	mitochondrion

plastid: 20089766
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29763	Sorghum	plastid	89.31	90.7
TraesCS6B01G206800.1	Wheat	golgi	81.37	85.97
HORVU6Hr1G036830.1	Barley	plastid	81.07	85.65
TraesCS6D01G166400.1	Wheat	mitochondrion, plastid	80.76	85.46
TraesCS6A01G178000.1	Wheat	golgi	80.31	85.39
GSMUA_Achr7P08430_001	Banana	plastid	63.51	73.5
Zm00001d011471_P001	Maize	plastid	69.01	71.29
Zm00001d044060_P001	Maize	extracellular, plasma membrane	68.86	69.38
GSMUA_Achr2P16990_001	Banana	plastid	63.97	69.14
GSMUA_Achr10P...	Banana	mitochondrion	63.82	68.86
Zm00001d038035_P002	Maize	plastid	14.96	50.78
Zm00001d039684_P001	Maize	cytosol	7.79	46.36

Protein Annotations

MapMan:24.2.2.14	UniProt:A0A1D6H7J2	InterPro:ADP_ATP_car	ProteinID:AQK70731.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005215	GO:GO:0005471	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006862	GO:GO:0008150	GO:GO:0009507
GO:GO:0009536	GO:GO:0015866	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0031969
PFAM:PF03219	PANTHER:PTHR31187	PANTHER:PTHR31187:SF3	TIGRFAMs:TIGR00769	TMHMM:TMhelix	UniParc:UPI0008445767
EnsemblPlantsGene:Zm00001d016411	EnsemblPlants:Zm00001d016411_P001	EnsemblPlants:Zm00001d016411_T001	SEG:seg	:	:

Description

ADPATP carrier protein 1 chloroplastic

Coordinates

chr5:-:161327143..161330435

Molecular Weight (calculated)

70704.3 Da

IEP (calculated)

10.027

GRAVY (calculated)

0.401

Length

655 amino acids

Sequence
(BLAST)

001: MESGLVASHR LRVPPPSASA GHHHLIRHRH AHAPVAAAPL RLSLPRHLPR STPLRLPAAL PLRHCLPPLR AASAAAAAVP APGDDASPKF LGVETKTIKK
101: IVPLGLMFFC ILFNYTILRD TKDVLVVTAK GSSAEIIPFL KTWVNLPMAV GFMLLYTKLA DVLSKEALFY AVIFPFIAFF GAFAYVLYPM RDAIHPTALA
201: DRLLASLGPS FLGPVAILRV WSFCLFYVMA ELWGSVVISV LFWGFANQIT TVEEAKEFYP LFGLGANVAL IFSGRTVKYF SNMRKNLGPG VDGWAISLKA
301: MMSIVVVLGL VITGIYWGVN KFVIDNSSVP VVERKKKVGP GRFSSSCVYG SLLNGSANIT FQDKPKLSMG ESMKVLLSSR YVRDLATLVV AYGISINLVE
401: VTWKSKLKAQ FPSPNEYSSF MGDFSTATGI ATFTMMLLGR VILRKFGWGV AATITPAVLL LTGVGFFSLI LFGEPLTPLM TKFGMTPLLA AVYVGAMQNI
501: FSKSAKYSLF DPCKEMAYIP LDEDMKVKGK AAIDVVCNPL GKSGGALIQQ FMILSFGSLA NSTPYLGGIL LVIVLAWLGA VRSLDLQFSS LAKQELGREK
601: LLKTQAVETV AEVVGTGNGS LQETLASEPS ANGAATKQSQ EPESTASEKS GQQSQ

Best Arabidopsis Sequence Match ( AT1G80300.1 )
(BLAST)

001: MEAVIQTRGL LSLPTKPIGV RSQLQPSHGL KQRLFAAKPR NLHGLSLSFN GHKKFQTFEP TLHGISISHK ERSTEFICKA EAAAAGDGAV FGEGDSAAVV
101: ASPKIFGVEV ATLKKIIPLG LMFFCILFNY TILRDTKDVL VVTAKGSSAE IIPFLKTWVN LPMAIGFMLL YTKLSNVLSK KALFYTVIVP FIIYFGAFGF
201: VMYPLSNYIH PEALADKLLT TLGPRFMGPI AILRIWSFCL FYVMAELWGS VVVSVLFWGF ANQITTVDEA KKFYPLFGLG ANVALIFSGR TVKYFSNLRK
301: NLGPGVDGWA VSLKAMMSIV VGMGLAICLL YWWVNRYVPL PTRSKNKKEK PKMGTMESLK FLVSSPYIRD LATLVVAYGI SINLVEVTWK SKLKAQFPSP
401: NEYSAFMGDF STCTGVATFT MMLLSQYVFN KYGWGVAAKI TPTVLLLTGV AFFSLILFGG PFAPLVAKLG MTPLLAAVYV GALQNIFSKS AKYSLFDPCK
501: EMAYIPLDED TKVKGKAAID VVCNPLGKSG GALIQQFMIL SFGSLANSTP YLGMILLVIV TAWLAAAKSL EGQFNSLRSE EELEKEMERA SSVKIPVVSQ
601: DESGNGSLGE SPSSSPEKSA PTNL

Arabidopsis Description

AATP1ADP,ATP carrier protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39002]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.